Pairwise Alignments

Query, 331 a.a., sugar ABC transporter permease from Serratia liquefaciens MT49

Subject, 316 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

 Score =  172 bits (435), Expect = 1e-47
 Identities = 92/283 (32%), Positives = 156/283 (55%), Gaps = 9/283 (3%)

Query: 39  WLLVAPAMLLLAVVAGWPLLRTLFYSFTDAMLDAPDDYRFVGFANYLDLTEGGHHYGVLA 98
           +L ++P +LL+  V   PL+  + YSF    L  P    +VGF NY  L          +
Sbjct: 34  FLYLSPMILLIGSVMLIPLIVGISYSFQSIELLNPFATGWVGFENYEKLW---------S 84

Query: 99  DPLWWLAVGNTLRFSLLSVSLELVFGMLLALLMNQKFRGQGLVRTAILVPWAIPTIVSAK 158
           D  +W+A+ NT  ++  S+  +   G+ LA+L+N +F G+ L +  + +PWA+PT +SA 
Sbjct: 85  DRKFWIALENTFFWTFWSIFFQFFLGLGLAMLLNTQFFGKKLFQALVFLPWAVPTFLSAL 144

Query: 159 MWGWMFHDQYGVVNDLLLKTGIIATPLAWVAEPGLSMWAVVIADVWKTTPFMALMLLAAL 218
            W W+F+   G +   L   G+++ P   + +P L++W  + A++W   PF A+ LLAAL
Sbjct: 145 TWAWLFNPVIGPIPHWLAALGVLSEPYNILGDPDLAIWGPITANIWFGVPFFAITLLAAL 204

Query: 219 QLIPGDLYEAARIDGANAWQRFRRITLPLIMPAMIVALIFRVMDALRVFDLIYVLTSNSE 278
           Q IPG+LYEAA IDGA  WQ F +ITLP + P + + ++ R +      DLI+V+T    
Sbjct: 205 QSIPGELYEAAEIDGATPWQSFTKITLPFLAPMIAITVMLRTIWIANFADLIFVMTGGGP 264

Query: 279 ATVSVSGYARDRMVSYQEMGSGSAASVLVFMMVAGIAACFLTL 321
           A  +          +++++  G A+++ V +++  +A   + L
Sbjct: 265 ANSTQILSTYIFTTAFRKLDFGYASTIAVALLIILLAYAVILL 307