Pairwise Alignments

Query, 281 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

Subject, 288 a.a., ABC transporter for L-Fucose, permease component 2 (from data) from Sinorhizobium meliloti 1021

 Score =  146 bits (369), Expect = 4e-40
 Identities = 84/287 (29%), Positives = 148/287 (51%), Gaps = 13/287 (4%)

Query: 2   KLSRQQQKYGHKTLIFAAAALASVICLFPFYYALITSLRSGQDLFQV--AYLPGNLHWGN 59
           +L R+  K  H   +F A     VICL P  + +++SLR   ++      ++P  L    
Sbjct: 8   RLRRRLLKVAHLAGLFLAML---VICL-PGLWIVLSSLRPTVEIMAKPPVWIPETLSLDA 63

Query: 60  YLTALMENG-----IARSLLNSIVVATLTVGICLLVSITAAFALARIRFRGRKYLLFTIL 114
           Y       G     +     NS++V+  +  I L + ++  +A AR RF+ +  +    +
Sbjct: 64  YRAMFSGAGQGGVPVWDYFRNSLIVSVTSTVIALAIGLSGGYAFARYRFKAKSAIFLGFM 123

Query: 115 CVSMFPQVAVLSGMFELVRFMGLYDSLGALVLSYTTFSLPFTVWVLTTFMKAIPAELEEA 174
                P +A+   +F L    G+ D+  +L+L+Y   ++PFT+W++  F + +P +L EA
Sbjct: 124 LTRAVPGIALSLPLFMLYARTGIIDTHFSLILTYVALNVPFTIWLIDGFFRQVPKDLAEA 183

Query: 175 AIVDGAGTWTIITRIFAPIMGPSLVTTGLLAFIGAWNEFMFALTFVISSGKRTVPVAIGM 234
           A +DG   W    ++  P+ GP + + G+ AF+ +WNE+  A     S   +T+PV  G+
Sbjct: 184 AQIDGCTPWQAFWQVEFPLAGPGIASAGIFAFLTSWNEYALASQITRSVNSKTLPV--GL 241

Query: 235 LQGASQFELPWGTIMAASVIVTLPIIALVLIFQRRIVSGLTNGAVKG 281
           L   ++F + W  + A +V++ +P + L  I Q+ +VSGLT GAVKG
Sbjct: 242 LDYTAEFTIDWRGMCALAVVMIVPALTLTFIIQKHLVSGLTFGAVKG 288