Pairwise Alignments

Query, 281 a.a., carbohydrate ABC transporter permease from Serratia liquefaciens MT49

Subject, 283 a.a., binding protein-dependent transport system, inner membrane component from Phaeobacter inhibens DSM 17395

 Score =  157 bits (396), Expect = 3e-43
 Identities = 85/267 (31%), Positives = 144/267 (53%), Gaps = 4/267 (1%)

Query: 17  FAAAALASVICLFPFYYALITSLRSGQDLFQ--VAYLPGNLHWGNYLTALMENGIARSLL 74
           +AA A      LFP Y+ +  ++     +F      LP  + + N+ T L E        
Sbjct: 19  YAAIAFYLGFALFPLYWLMKIAITPDALIFSEGTRMLPSAVTFENFATVLFETEFLAYFR 78

Query: 75  NSIVVATLTVGICLLVSITAAFALARIRFRGRKYLLFTILCVSMFPQVAVLSGMFELVRF 134
           NS+ V+  T     L++  A +A +R  F G++ ++  +L   MFP + +++ ++++V  
Sbjct: 79  NSLTVSLGTAFFTTLIAAGAGYAFSRFVFAGKRIIIAVMLITQMFPLLMIIAPIYKIVAD 138

Query: 135 MGLYDSLGALVLSYTTFSLPFTVWVLTTFMKAIPAELEEAAIVDGAGTWTIITRIFAPIM 194
           +GL +SL +L++ YT F++PF  +++ +F   IP +LEEAA++DG   +  +  +  P+ 
Sbjct: 139 LGLLNSLTSLIVVYTAFNIPFATFLMQSFFDGIPKDLEEAAMMDGCSRFQALRTVVFPLT 198

Query: 195 GPSLVTTGLLAFIGAWNEFMFALTFVISSGKRTVPVAIGMLQGASQFELPWGTIMAASVI 254
            P L  T    F  AW+E +FAL  +  +   T PV  G+L   S+F + WG +MAA V+
Sbjct: 199 LPGLGATLGFVFTAAWSELLFALMLISKNDAMTFPV--GLLTFVSKFSVDWGQMMAAGVL 256

Query: 255 VTLPIIALVLIFQRRIVSGLTNGAVKG 281
             +P     +  QR +V GLT+GAVKG
Sbjct: 257 ALVPSCLFFIFIQRYLVQGLTSGAVKG 283