Pairwise Alignments

Query, 688 a.a., formate hydrogenlyase transcriptional activator FlhA from Serratia liquefaciens MT49

Subject, 507 a.a., Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  271 bits (693), Expect = 6e-77
 Identities = 188/532 (35%), Positives = 277/532 (52%), Gaps = 68/532 (12%)

Query: 189 DVTNAVLSKLDLDDLIGEISKEIHRFFKIDAISIVLCVDKTEQVTIYSTHYLQDDVVERQ 248
           + T  + S L+L+  +    + + +   ID I +           IY   Y   D+    
Sbjct: 8   EATQRLCSSLELEQSLRAYFEYVRQHLPIDGIYL----------NIYRPEY--GDIQFLA 55

Query: 249 QYSVALAGTLSEQVMQSGEMLLLNLKHSDRLAAYERQLFDLWHEQ------------IQT 296
               A    L++QV  S EM  L L   DR     R + DL H+Q            IQ+
Sbjct: 56  HVDEAQTTALNKQVKISAEMEAL-LSQPDRPVI--RIINDLEHDQVTGFVAPQVIPNIQS 112

Query: 297 LCVLPLVFGNKTLGVLKLAQCQPDNFNAANLRVLQQIAERIAIAVDNALAYQEINRLKES 356
           + +L ++ GN  LGV+     Q   F   +  +++   + +++     L  + + R  ++
Sbjct: 113 VILLRMLSGNTHLGVVGFYAKQKAQFCHRHAELIEPHKDTLSLITAFNLKGRNLLRANQA 172

Query: 357 LVHENLYLTEQINGNNPDFGEIVGRSVVMSAVLKQVEMVAKSDCSVLILGETGTGKELIA 416
           L  +N  L +  N        ++G    +  V+ QVE +AK   SVLILGETG GKE+IA
Sbjct: 173 LTQQNRLLKQAFNPCG-----VIGADSGLKRVMTQVEAIAKLHTSVLILGETGCGKEVIA 227

Query: 417 RAIHNLSERRDQRMVKMNCAVMPAGLLESDLFGHEKGAFTGATNQRMGRFELADKGTLFL 476
            A+H  S+R D+  +K+NC  +P  L++S+LFG+EKGAFTGA +++ G FE A+ GT+FL
Sbjct: 228 NAVHCKSQRADKPFIKVNCGAIPESLIDSELFGYEKGAFTGAEHRKAGFFEQANGGTIFL 287

Query: 477 DEVGEIPVELQPKLLRVLQEREFERVGGNKVISVDVRLIAATNRDLQQMVADREFRSDLF 536
           DE+GE+P+ +Q +LLRVLQ     RVGG   I++D+R+IAAT+R+LQ MV  + FR DL+
Sbjct: 288 DEIGELPLSVQVRLLRVLQNGTITRVGGFDAINLDIRVIAATHRNLQAMVKKQTFREDLW 347

Query: 537 YRLNVFPIVIPPLRERPEDIPQLVKFLTYKIARRMKRTIDSIP---AETLRLLSQMPWPG 593
           YRL VFPI IP LR+R  DIP LV+     +A   K  +D +P   +E L  L+   WPG
Sbjct: 348 YRLAVFPIEIPSLRQRRSDIPLLVQHFIEVLA--AKFNLDKLPRVSSEQLDSLNHYHWPG 405

Query: 594 NVRELENVIERAVLLTRGTVLNLQLPELQYPVPSMALPVPKAEPSQPGEDE--------- 644
           NVREL NV+ERA++      LN  L +           V K EP+  G+ E         
Sbjct: 406 NVRELINVLERAMIEAPEGPLNFNLTQ-----------VDKVEPAASGKHETIIIDPSHA 454

Query: 645 -----------RQQIIRVLKETNGVVAGPRGAAQRLGLKRTTLLSRMKKWGI 685
                       + I   ++ T G + GP GAA+ L +   TL S+MKK G+
Sbjct: 455 SDKLVPLDVMVSKYIAHAMRITGGKLYGPGGAAEMLDINPNTLRSKMKKLGL 506