Pairwise Alignments

Query, 688 a.a., formate hydrogenlyase transcriptional activator FlhA from Serratia liquefaciens MT49

Subject, 515 a.a., nif-specific regulatory protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  293 bits (750), Expect = 1e-83
 Identities = 191/505 (37%), Positives = 289/505 (57%), Gaps = 25/505 (4%)

Query: 190 VTNAVLSKLDLDDLIGEISKEIHRFFKIDAISIVLCVDKTEQVTIYSTHYLQDDVVERQQ 249
           ++N +   L L+D + E  + +     +   +I L   +T Q+ I ++H L  +  ER  
Sbjct: 16  ISNVIDRALQLEDALTETLRVLAETLAMQRGTITLLDGETGQLVIAASHGLSREEQERGV 75

Query: 250 YSV--ALAGTLSEQVMQSGEMLLLNLKHSDRLAAYERQLFDLWHEQIQTLCVLPLVFGNK 307
           Y +   + GT    +  +G   L+    +D L         +   ++  L V P++   +
Sbjct: 76  YRLDEGVTGT----IFSTGRPYLVRDVRNDPLFLDRTGARRVERGKVSFLGV-PILSKGR 130

Query: 308 TLGVLKLAQCQPDNFNAA-NLRVLQQIAERIA--IAVDNALAYQEINRLKESLVHENLYL 364
            +GVL + +   D  + A ++  L+ +A  +A  ++++  +A +E      +L  EN+ L
Sbjct: 131 PVGVLNVDRLFGDAVSCAEDIEFLEVVATLVAQFLSLNEQVAARE-----RALRRENMQL 185

Query: 365 TEQINGNNPDFGEIVGRSVVMSAVLKQVEMVAKSDCSVLILGETGTGKELIARAIHNLSE 424
             ++  +  DF  IVGRS  M+ V + ++ VA +  +VL+LGE+G GK LIAR +H LSE
Sbjct: 186 RTRVLDSRGDF--IVGRSGAMAEVQRYIQRVAGTRATVLLLGESGVGKTLIARLVHTLSE 243

Query: 425 RRDQRMVKMNCAVMPAGLLESDLFGHEKGAFTGATNQRMGRFELADKGTLFLDEVGEIPV 484
           R     +K+NCA +P  LLE++LFGHEKGAFTGA + RMGRFE A +GT+FLDE+GE+P 
Sbjct: 244 REHHPFIKVNCASIPESLLEAELFGHEKGAFTGAVSARMGRFEEAHEGTVFLDEIGELPP 303

Query: 485 ELQPKLLRVLQEREFERVGGNKVISVDVRLIAATNRDLQQMVADREFRSDLFYRLNVFPI 544
            +Q KLLRVLQEREFER+G N+   V+VR++AATNRDL   V    FR DL+YRL VFPI
Sbjct: 304 GIQAKLLRVLQEREFERLGSNRTRRVNVRIVAATNRDLAAQVDAGRFRQDLYYRLCVFPI 363

Query: 545 VIPPLRERPEDIPQLVKFLTYKIARRMKRTIDSIPAETLRLLSQMPWPGNVRELENVIER 604
            +PPLRERPEDI  L+     K+AR   R++   P + L LL +  WPGNVRE+EN+IER
Sbjct: 364 RVPPLRERPEDITGLLNHFLAKVARDYGRSLVLAP-DALELLQRYAWPGNVREMENLIER 422

Query: 605 AVLLTRGTVLNLQLPEL---QYPV-PSMALPVPKAEPSQPGEDERQQIIRVLKETNGVVA 660
             +LT GT+ + +  E    Q P      +    A P    E E+ +++  L+    +  
Sbjct: 423 MAILTDGTLADRRFVESLLEQAPAGDDGQMRAGLAVPPSLREVEQGELLAALRRNGWI-- 480

Query: 661 GPRGAAQRLGLKRTTLLSRMKKWGI 685
               AA+ LGL    +  R+++WG+
Sbjct: 481 -QHKAARELGLTPRQMGYRIRQWGL 504