Pairwise Alignments

Query, 240 a.a., ABC transporter permease subunit from Serratia liquefaciens MT49

Subject, 229 a.a., amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family from Pseudomonas stutzeri RCH2

 Score =  153 bits (387), Expect = 2e-42
 Identities = 84/216 (38%), Positives = 131/216 (60%), Gaps = 6/216 (2%)

Query: 19  SDVTGLAMTAKLFLLSVVPGLVLAMLMAIGQVYGPRPLSYLIRSVTYFFRSTPLYLQLML 78
           S + G  +T +L  +SV+ GL++A+ + I +      +  L     +FFR TPL +QL L
Sbjct: 12  SFIDGAWLTLQLVGVSVIAGLIVAVPLGIARSSRHLAVRALPYGYIFFFRGTPLLVQLFL 71

Query: 79  IYYGLSQFDVVQLGWQNDQPFWLLFRDATFCATLALVLNTSAYVAQLLAGMMETFPRQEW 138
           +YYG++QFDVV+         W   RD  +CA + + L+T+AY+A+++ G ++  P  E 
Sbjct: 72  VYYGMAQFDVVR-----QSALWPYLRDPYWCAIITMTLHTAAYIAEIIRGAIQNVPHGEI 126

Query: 139 IAGEAYGMSQRQIIRRLVLPATLRRGIPALNNEMVFLLHATSLASTVTLLDITGVARALY 198
            A  A GMS+ Q +  ++LP   R G+PA +NE++ +L A++LAST+TLL++TG+AR + 
Sbjct: 127 EAARALGMSRSQALLHIILPRATRIGLPAYSNEVILMLKASALASTITLLELTGMARKIA 186

Query: 199 AATYSPFIPFLMAAALYLLCTFLLIFLFSRAERRWL 234
           A TY     FL A  +YLL  F+L+  F   E RWL
Sbjct: 187 ARTYLHEEMFLTAGLIYLLIAFILMQGFKLLE-RWL 221