Pairwise Alignments

Query, 357 a.a., sugar ABC transporter substrate-binding protein from Serratia liquefaciens MT49

Subject, 311 a.a., D-ribose ABC transporter substrate-binding protein from Pantoea sp. MT58

 Score = 51.6 bits (122), Expect = 3e-11
 Identities = 68/275 (24%), Positives = 118/275 (42%), Gaps = 43/275 (15%)

Query: 30  AAIANHQGPIRIAVIRNLGSDDNT--TQFVSGAVQEGRKLGFQVNTFLTNGDDAKFQ-DF 86
           AA A  +G I I V     S DN        GA  + ++LG++  T L++G+D K Q + 
Sbjct: 19  AAFAAEKGTIMILV----NSLDNPYYASEAKGANLKAQELGYKT-TVLSHGEDVKKQSEL 73

Query: 87  VNQAISQKYDGIILSQGRDPYSTALLKRIADSGIAVAAFDTAVQGEIPGVTITQQDDASL 146
           ++ AI +K  GI+L       S A +K+  D+GI V      +  EIP       DD +L
Sbjct: 74  IDAAIGKKVQGIVLDNADSTASVAAIKKAKDAGIPV----VLINREIP------VDDVAL 123

Query: 147 TDLSFGQLVKDFNGQANIIKLWVAGFPPMER---------------RQAQYQKLLKQQPG 191
             ++      +F   +++  ++V       +               R   + ++L Q P 
Sbjct: 124 AQITH----NNFQAGSDVANVFVEKMGEKGKYAELACNLADNNCVTRSKSFHQVLDQYPD 179

Query: 192 IKELESIGAVSSDVQGDTANKIGAILAKYPKGKIDAIWGTWDAFSQGAYKALQENGRTEI 251
           ++ +    A  + + G     + +IL  +P  K   I G     + GA  AL+  GR ++
Sbjct: 180 MQSVARQDAKGTLIDGKRI--MDSILQAHPDVK-GVICGN-GPVALGAIAALKAAGRNDV 235

Query: 252 KLYSIDISNQDLALMRAKDSAWKLSVAVDPKLIGA 286
            +  ID SN +   ++A     K +V +  + I A
Sbjct: 236 IVVGIDGSNDERDAVKA--GTLKATVMLQAQAIAA 268