Pairwise Alignments

Query, 572 a.a., peptidoglycan synthase from Serratia liquefaciens MT49

Subject, 679 a.a., Probable penicillin-binding membrane protein PbpB from Mycobacterium tuberculosis H37Rv

 Score =  189 bits (481), Expect = 2e-52
 Identities = 168/580 (28%), Positives = 265/580 (45%), Gaps = 42/580 (7%)

Query: 24  ILVCFFLLAFRVGYLQLLEHQQLADQADQRSIRTQVLPTNRGMITDRNGEALAVSVSSKD 83
           ILV   + A ++ +LQ+     L  QA  +   T V P  RG I DRN + LA ++ ++ 
Sbjct: 95  ILVLMLVAATQLFFLQVSHAAGLRAQAAGQLKVTDVQPAARGSIVDRNNDRLAFTIEARA 154

Query: 84  IVLDPKHI------LDTHTDIGNERWQSLANVLKMPLPEVQR-------LIQANAHKRFV 130
           +   PK I          T    +  Q L ++ +    ++         L +  + + FV
Sbjct: 155 LTFQPKRIRRQLEEARKKTSAAPDPQQRLRDIAQEVAGKLNNKPDAAAVLKKLQSDETFV 214

Query: 131 YLARKVEDDNADYISKLRLTGVSTLQDFSRFYPMSQDAAGLIGIVGQDNQGLEGIELGFN 190
           YLAR V+   A  I   +   V   +   R YP    AA ++G +  D  GL G+E   +
Sbjct: 215 YLARAVDPAVASAIC-AKYPEVGAERQDLRQYPGGSLAANVVGGIDWDGHGLLGLEDSLD 273

Query: 191 HLLQGKNGLRVYQKDGSGAVI-GVIKN-VDPVPPPNVTLSIDKFIQYVLYAQIRDGVVAN 248
            +L G +G   Y +   G VI G  +N    V    V L++D  IQ+ +  Q++     +
Sbjct: 274 AVLAGTDGSVTYDRGSDGVVIPGSYRNRHKAVHGSTVVLTLDNDIQFYVQQQVQQAKNLS 333

Query: 249 QADSGCAVLVKVNTGEVLGMASYPSFNPN-NYANTPAKDIRNVCSSDSFEPGSTVKPVVV 307
            A +  AV++   TGEVL MA+  +F+P+ +      K + N   S  FEPGS  K V  
Sbjct: 334 GAHNVSAVVLDAKTGEVLAMANDNTFDPSQDIGRQGDKQLGNPAVSSPFEPGSVNKIVAA 393

Query: 308 MVGLEHRLIKPDTVLDTT-PYRVNGHLIKDVGHWSKL--TITGVLQKSSDIAVSHIALAL 364
              +EH L  PD VL      ++ G  + D      +  T TGV  KSS++    ++  +
Sbjct: 394 SAVIEHGLSSPDEVLQVPGSIQMGGVTVHDAWEHGVMPYTTTGVFGKSSNVGTLMLSQRV 453

Query: 365 PATVLPAVYKSFGLGRPTDLGIGNESSGYLPQHRERWADIERATFSFGYGLRVTPLQMAR 424
                  + + FGLG+ T +G+  ES+G +P   ++W+    A    G GL +T LQM  
Sbjct: 454 GPERYYDMLRKFGLGQRTGVGLPGESAGLVPP-IDQWSGSTFANLPIGQGLSMTLLQMTG 512

Query: 425 EYAAIGSYGVYRPLSITRVTPPVMGQ----------RILPEDTVKTVVHMM------ESD 468
            Y AI + GV  P  I + T    G           R++   T +TV  M+      +  
Sbjct: 513 MYQAIANDGVRVPPRIIKATVAPDGSRTEEPRPDDIRVVSAQTAQTVRQMLRAVVQRDPM 572

Query: 469 ALPGGSGVSAAVPGYRLAIKTGTAEKM--GTNGKYDGGYINYTAGVAPASDPQVALVVMV 526
               G+G +A VPGY++A KTGTA+++  G    +D  Y    AG+A A +P+  + +M+
Sbjct: 573 GYQQGTGPTAGVPGYQMAGKTGTAQQINPGCGCYFDDVYWITFAGIATADNPRYVIGIML 632

Query: 527 NNPKAGKHFG-GSVAGPVFGKIMAQVLEHMNI--LPDAQP 563
           +NP        G  A P+F  I   +++  N+   PD  P
Sbjct: 633 DNPARNSDGAPGHSAAPLFHNIAGWLMQRENVPLSPDPGP 672