Pairwise Alignments

Query, 426 a.a., voltage-gated ClC-type chloride channel ClcB from Serratia liquefaciens MT49

Subject, 578 a.a., voltage-gated chloride channel protein ClcB from Herbaspirillum seropedicae SmR1

 Score =  281 bits (718), Expect = 5e-80
 Identities = 169/405 (41%), Positives = 242/405 (59%), Gaps = 14/405 (3%)

Query: 24  GIAAALVVWLFHRAMLGLEWLLLDHESGSLVAAASALPAWRRALTPALGGLAAGT-LLWV 82
           G   AL    F   +  L+  +  H+ GS V  A  LP + R L P  GG+ AG  L+W 
Sbjct: 32  GFVGALATIAFRECIALLQIWMTGHD-GSFVDIAKGLPWYTRVLLPTCGGVVAGLFLVWA 90

Query: 83  YQRYQHQRQIAPT--DYMEAIETGDGRLDVSASLVKCLASLLVVSSGSAIGREGAMILLA 140
                 +R  A    DYMEA+  GDG + V  +L++ ++SL  ++SG +IGREG M+ L+
Sbjct: 91  ------KRTPAGNGGDYMEAVAIGDGAIPVRNTLLRSISSLASIASGGSIGREGPMVQLS 144

Query: 141 ALVGSVFAQRFTH--EKEWKLWVACAAAAGMASAYHAPLAGSLFIAEILFGTLMLASLGP 198
           AL  S+   +F+H      +L VAC AAAG+ SAY+AP+AG+ FI EI+ G+L++ S GP
Sbjct: 145 ALCASLVG-KFSHFPSSRLRLLVACGAAAGITSAYNAPIAGAFFITEIVLGSLVMESFGP 203

Query: 199 VVIAAVCALLMTNLLNGGQAPLYLVEPLPAPWPVQYLLMALLGVLAGICGPLFLWAMQAT 258
           VV+A+V A +    L G +A  Y +   P     + +L  +LGVLAG+  P FL  ++  
Sbjct: 204 VVVASVVANITMRELPGYRAA-YEMPYFPEIGGWEVMLFLVLGVLAGVLAPQFLRVLELG 262

Query: 259 GHAFRSLRLKPPLQLALGGLIVGLLSLLFPEVWGNGYSVVQSLLSAPPGVLLVGAILICK 318
            H F  LRL  P++L +GGL+VGL+S+  PEVWGNGYS+V SLL        V  +L+ K
Sbjct: 263 KHGFGKLRLPLPVRLGVGGLLVGLISVQVPEVWGNGYSLVNSLLHTSWVWQAVLMVLVVK 322

Query: 319 LLAVLASSGSGAPGGVFTPTLFVGAALGSVIGQLCATWPELGSAVPLLMALTGMATLLAA 378
           +LA   + GSGA GG+FTPTLFVGAA+G + G        +  + P   A+ GM   LAA
Sbjct: 323 VLATSITVGSGAVGGIFTPTLFVGAAVGYLFGDAAQALLPVHISQPFAYAMVGMGAFLAA 382

Query: 379 TTHAPIMAALMVFEMTGEYTLLPGILLACVIATTVSRGLRSVSVY 423
            ++AP+MA LM+FEMT  Y ++  ++L+CV+A  V+R +   S+Y
Sbjct: 383 ASYAPLMAILMIFEMTLSYQVVLPLMLSCVVAYVVARSVDGRSMY 427