Pairwise Alignments

Query, 511 a.a., L-arabinose ABC transporter ATP-binding protein AraG from Serratia liquefaciens MT49

Subject, 503 a.a., ribose import ATP-binding protein RbsA from Phaeobacter inhibens DSM 17395

 Score =  402 bits (1033), Expect = e-116
 Identities = 223/505 (44%), Positives = 325/505 (64%), Gaps = 4/505 (0%)

Query: 1   MTTALPYLAFKGIGKTFPGVKALDDISFSCQAGQIHALMGENGAGKSTLLKILSGNYSPT 60
           MT   P L  +GI KTFPGV+ALD +S +   G++HALMGENGAGKSTL+K+L G + P 
Sbjct: 1   MTEQSPVLRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPD 60

Query: 61  QGEIQLQGRSVTFANTTDALDAGVAIIYQELHLVPEMTVAENIYLGQLPTRR-GLVDRKL 119
           +G+I +  + V  +   DA   G+  I+QEL L  E++VAENIYLG+LP +R GLVD   
Sbjct: 61  EGQIIVAEQPVVMSGPLDAKAKGIVFIHQELSLADELSVAENIYLGELPRKRFGLVDWAE 120

Query: 120 LRYESRLQLEHLGLDIDPDTPLKYLSIGQWQMVEIAKALARNAKVIAFDEPTSSLSAREI 179
           L  ++   LE L +  +  T +  LSI   QMVEIA+AL  +AK + FDEPT+SL+  E 
Sbjct: 121 LEAKTNAILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTASLTDAEK 180

Query: 180 EQLFRVIRELRAEGRVILYVSHRMEEIFALSDAITVFKDGRYVRTFDDMRQVDNAQLVQA 239
             LF VI +L+ +G  I Y+SHRMEEIF ++D I+V +DG+Y  T  +  + +   + Q 
Sbjct: 181 VVLFEVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTV-NTAETNEENVTQM 239

Query: 240 MVGRDLGDVYGYQPRELGPVRLALRGLQAPGVKTPIDLSVRAGEIVGLFGLVGAGRSELM 299
           M+GR L         ELG V L +RGL    +   ++  VR GE+VG +GLVGAGR+E+ 
Sbjct: 240 MIGRKLDLSRNEAHHELGEVALEVRGLSCGSLFEDVNFEVRRGEVVGFYGLVGAGRTEIA 299

Query: 300 KGIFGATRVSAGQLMLDGQVLAIRSPIDAIRAGIMLCPEDRKADGIIPVHSVRDNINISA 359
           + +FG    ++G + LDG  +AI SP DAI  GI L PEDRK  G++   + RDN+ +  
Sbjct: 300 ETLFGLRNPTSGSIFLDGAEVAITSPHDAIERGISLVPEDRKGQGLVLGMNCRDNMTL-P 358

Query: 360 RRNSVRAGCLIDNGWEASNAEHHIRALNIKTPSAEQLIMNLSGGNQQKAILGRWLSEDMK 419
           + + ++AG  + +G E +  + +   L+I+TP  +QL+ NLSGGNQQK ++G+WLS    
Sbjct: 359 QVDDLKAGPFVADGAEIAIFDQYRDKLDIRTPGWKQLVGNLSGGNQQKIVIGKWLSMRPN 418

Query: 420 VILLDEPTRGIDVGAKHEIYNVIYQLAQRGIAVLFASSDLPEVLGLADRILVMREGALSG 479
           V+++DEPTRGIDVG+K EI+N++  LA +G AV+  SS++PEVL +ADRI+ M  G +  
Sbjct: 419 VLIVDEPTRGIDVGSKAEIHNLLRDLAAQGYAVIVISSEMPEVLHVADRIVAMYSGRIMR 478

Query: 480 ELLHDDASEEKAL-SLAMLRTPEIA 503
               ++ +EE  + +++ L T ++A
Sbjct: 479 TFTSEEVTEENLIAAISGLDTEKVA 503



 Score = 91.3 bits (225), Expect = 7e-23
 Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 15/259 (5%)

Query: 255 ELGPVRLALRGLQA--PGVKT--PIDLSVRAGEIVGLFGLVGAGRSELMKGIFGATRVSA 310
           E  PV L L G+    PGV+    + L++  GE+  L G  GAG+S LMK + G  +   
Sbjct: 3   EQSPV-LRLEGIVKTFPGVRALDGVSLTILPGEVHALMGENGAGKSTLMKVLGGIHQPDE 61

Query: 311 GQLMLDGQVLAIRSPIDAIRAGIMLCPEDRK-ADGIIPVHSVRDNINISARRNSVRAGCL 369
           GQ+++  Q + +  P+DA   GI+   ++   AD +    SV +NI +       R G L
Sbjct: 62  GQIIVAEQPVVMSGPLDAKAKGIVFIHQELSLADEL----SVAENIYLGELPRK-RFG-L 115

Query: 370 IDNGWEASNAEHHIRALNIKTP-SAEQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTR 428
           +D  W    A+ +     +K   +A+  + +LS  NQQ   + R L+ D K ++ DEPT 
Sbjct: 116 VD--WAELEAKTNAILEKLKVGFNAKTRVGDLSIANQQMVEIARALTVDAKAVIFDEPTA 173

Query: 429 GIDVGAKHEIYNVIYQLAQRGIAVLFASSDLPEVLGLADRILVMREGALSGELLHDDASE 488
            +    K  ++ VI  L ++G+ + + S  + E+  + DRI V+R+G   G +   + +E
Sbjct: 174 SLTDAEKVVLFEVISDLQEQGVGIAYISHRMEEIFKITDRISVLRDGQYQGTVNTAETNE 233

Query: 489 EKALSLAMLRTPEIAPDTA 507
           E    + + R  +++ + A
Sbjct: 234 ENVTQMMIGRKLDLSRNEA 252