Pairwise Alignments

Query, 781 a.a., electron transport complex subunit RsxC from Serratia liquefaciens MT49

Subject, 790 a.a., iron-sulfur cluster-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  589 bits (1518), Expect = e-172
 Identities = 349/793 (44%), Positives = 469/793 (59%), Gaps = 93/793 (11%)

Query: 1   MLNLFAAFKKDRIWDFDGGIHPPEMKTQSSGVPLRTAPLPDTFVIPLQQHLGPEGELCVN 60
           ML L     K  +W   GGIHPPE+K  S+  P+   PL   +++P+ Q +G    L V 
Sbjct: 1   MLTLLDQLDKGTLWRSPGGIHPPEVKFLSNTTPISQLPLAREYLVPVPQ-VGENCTLAVK 59

Query: 61  VGEHVLKGQPLTVGRGRT-VPVHAPTSGTISAIKPHITAHPSGLAELCVIIQPDGEDRWC 119
           VG+ VLKG PLT G     +PVHAPTSG + AI+   + H S L     +I  DGEDRWC
Sbjct: 60  VGDKVLKGTPLTQGTSIWHLPVHAPTSGAVVAIELRASNHASALPVNTCVIAADGEDRWC 119

Query: 120 ERAPVADYRQLPTGELIQRIHQAGIAGLGGAGFPTASKLQGGMNGVETLILNAAECEPYI 179
           E         L   ++I +IH AGIAG+GGA FP+  KL   ++ +E +I+N  ECEPYI
Sbjct: 120 ELTS-GSLDSLSNQQIITKIHAAGIAGMGGAAFPSHIKLNP-VSEIELVIINGVECEPYI 177

Query: 180 TADDRLMQEHADQVIEGTQILRHLLQPKVTLIGIEDNKPEAIEALKLALRDQP----GIS 235
           +ADDRLM+E++ +++ G  I+  LL PK  +I IEDNKPEAI+A++ A+         + 
Sbjct: 178 SADDRLMREYSQEILAGIGIIHRLLAPKRIVIAIEDNKPEAIQAMQNAVSQSTLPTGSVR 237

Query: 236 LRVIPTKYPSGGAKQLTKILIGKEVPHGKHSSAIGVLMQNVGTAFAIKRAIVDGEPLIER 295
           + VIPTKYPSGG KQL +I+ G+EVP G   + +G+++ NVGTAFAI +A+  G+PLIER
Sbjct: 238 VTVIPTKYPSGGEKQLIQIITGREVPSGAIPAKLGIVVHNVGTAFAIHQAVTQGKPLIER 297

Query: 296 VVTLTGEALSQPGNLWARIGTPVQHLLNFAGFQPQAQQMVVMGGPLMGFTLPALNVPIVK 355
           VVT+TG+ + +PGN W  IGTPV+H+L    F   A Q V++GGP+MG  LP + VPI+K
Sbjct: 298 VVTVTGQNVGKPGNYWLPIGTPVEHVLAHTEFNAAADQKVIIGGPMMGHALPTIQVPILK 357

Query: 356 ISNCILAPSVSEMAPQEPEQSCIRCGLCVDACPAGLLPQQLYWFSRGEEHEKARKHNLFD 415
            +NCIL PS  E+     E++CIRCG C +ACPA LLPQQL+W ++ EE++KA  +NL D
Sbjct: 358 GTNCILVPSSQEIGTTPEEKACIRCGECANACPALLLPQQLFWHAKAEEYDKAASYNLKD 417

Query: 416 CIECGACAFVCPSNIPLVQYYRQEKAEIKAIDQEAARTAEAKARYEAKLARLEREKLARE 475
           CIECG C++VCPS+IPLV+YYR  K+ +K    E  +   AK R+EA+L RLE EKLARE
Sbjct: 418 CIECGCCSYVCPSDIPLVEYYRIAKSALKQTADEKQQAERAKLRFEARLQRLEEEKLARE 477

Query: 476 ERHKKAAVK----LTDGDQDAVQAALARVRSKNAVPATG-------------TISGETPD 518
            + K+AA +    +T  D+DAV  A+AR+ +K A   T               +S + P 
Sbjct: 478 AKAKEAAARRQTTMTTTDKDAVAQAMARIAAKKAAQTTADDATATIATAEVDAVSTQAPK 537

Query: 519 NSEMIAA----REARKAQARE-RRAQQDAAATPATSPAVEGED-PRKAAVAAALARVKAK 572
               +AA     +A+KA A    +A+ DA ++  T+P  + E   +K  VAAA+AR KAK
Sbjct: 538 GKAAVAAAIARAKAKKAAATNVSQAEDDAESSKQTAPTEQAESLSQKDKVAAAIARAKAK 597

Query: 573 KEAQQADA---VGT---------PAEPVAVAQEEDPRKAAVAAALARVKAKKAAQQ---- 616
           K A  AD+    GT         P  P A   E D +KA VAAA+AR KAKKAA Q    
Sbjct: 598 KAAMNADSDANEGTDTAEINSDKPVIPSAANTEMDDKKAKVAAAVARAKAKKAAAQQTES 657

Query: 617 --AETVQSS----------------------TEPATAVPEEDPRKAAVAAAIARAKAKKA 652
             A  VQSS                      + P + +  ED +KA VAAA+ARAKAKKA
Sbjct: 658 NDAAEVQSSDVAESAQPSNATLKPELNSEPNSAPNSTLSPEDEKKAKVAAAVARAKAKKA 717

Query: 653 AQQ--------------------AEPIESPTEPAAAEQ--EEDPRKAAVAAAIARAKAKK 690
           A Q                    A+P  +P  P  + Q   ED +KA VAAA+ARAKAKK
Sbjct: 718 AAQQVELNEDIPAQPIVGAEPVSAQPSNAPLSPELSAQLSPEDEKKAKVAAAVARAKAKK 777

Query: 691 AAQQAETVESPVE 703
           AA++A+ +    E
Sbjct: 778 AAREADAISDSNE 790