Pairwise Alignments

Query, 361 a.a., electron transport complex subunit RsxD from Serratia liquefaciens MT49

Subject, 402 a.a., Na(+)-translocating NADH-quinone reductase subunit B from Marinobacter adhaerens HP15

 Score =  124 bits (311), Expect = 4e-33
 Identities = 94/328 (28%), Positives = 146/328 (44%), Gaps = 47/328 (14%)

Query: 34  WVMLACIPGVAAQVWF-FGYGTLIQTALAMLVALLAEGAILALRKLPVRTRLADNSALLT 92
           ++    I G  A VW  F YG      +  +  ++  G    +    VR    +    +T
Sbjct: 100 FIQALAITGAGAGVWDNFVYGMAYFVPIYFVTFVV--GGFWEVLFATVRRHEVNEGFFVT 157

Query: 93  ALLLGISLPPLAPWWMIVIGTFFAIVIAKQLYGGLGQNPFNPAMVGYVVLLIAFPVQMTS 152
           ++L  +  PP  P W + +G  F +VI K+++GG G+N  NPA+ G   L  A+P Q+  
Sbjct: 158 SVLFALICPPTIPLWQVALGITFGVVIGKEVFGGTGKNFLNPALTGRAFLYFAYPAQI-- 215

Query: 153 WLPPDELRATALSFQDTLLAIFSGHTAQGATIHELQMGIDGISQATPLDGFKTGLRSGHS 212
                                 SG T   A        +DG S AT L    +G      
Sbjct: 216 ----------------------SGDTVWTA--------VDGFSGATALSWAASGGLEALE 245

Query: 213 VEQVLQQPLFGGALAGIGWQWVNLGFLAGGLFMLARRLIHWQIPFSMLAAIAVCSGLAWW 272
             Q+     F G + G   +   L  L GGL +L  ++  ++I   +L  +    G++  
Sbjct: 246 A-QIGWMSAFVGTIQGSMGETSTLAVLIGGLILLVMKIASYRIVGGVLIGMI---GMSLL 301

Query: 273 LDPL-QQASPLI------HLFSGASMLGAFFIATDPVSASTTPKGRLIYGALIGVLVWLI 325
           L+ +  + +P+       HL  G    G  F+ATDPVSA+ T  GR  +G L+GV+  LI
Sbjct: 302 LNIVGSETNPMFAIPAHWHLVMGGFAFGMMFMATDPVSAAMTNTGRWCFGILVGVMTILI 361

Query: 326 RVYG-GYPDGVAFAVLLANITVPLIDHY 352
           RV    +P+G+  A+L AN+  PL+DHY
Sbjct: 362 RVINPAFPEGIMLAILFANLFAPLMDHY 389