Pairwise Alignments

Query, 403 a.a., Bcr/CflA family multidrug efflux MFS transporter from Serratia liquefaciens MT49

Subject, 433 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella amazonensis SB2B

 Score =  300 bits (769), Expect = 4e-86
 Identities = 163/378 (43%), Positives = 237/378 (62%), Gaps = 7/378 (1%)

Query: 2   RNSFGFMFYLAGLSMLGYLATDMYLPAFGMMQQDLQISAGAISASLSIFLAGFAFAQLLW 61
           R S  F  YLA LSMLG+LATDMYLPAF  ++  L  SA  ++ +L+ FL G A  QL +
Sbjct: 9   RRSLVFFPYLALLSMLGFLATDMYLPAFNQIESSLNTSASLVAMTLTCFLGGLAIGQLAY 68

Query: 62  GPLSDRLGRKPVLLIGLALFALGCLGMLWVQNAVQLWSLRFIQAIGVCSAAVTWQALVID 121
           G L D+ G++  L+ GL +FA+  + + + +N    + LR IQA G CSAAV WQALV++
Sbjct: 69  GSLCDKFGKRNTLMAGLGVFAVSSILLGFTENISVFFVLRVIQAFGACSAAVIWQALVME 128

Query: 122 RYREGKANRVFATIMPLVALSPALAPLVGAWLLNHMGWRAIFAVLLGITVLLLLPTLLLK 181
           ++ EG+A +VF++IMPLVALSPALAPL+GAW+    GWRAIF +L  + +LL   T  L 
Sbjct: 129 KFDEGEARKVFSSIMPLVALSPALAPLMGAWVSEQFGWRAIFIILAIVGLLLAAMTPALA 188

Query: 182 ESAKTVPSDDNKKSALSFFQLLKSRIFSGNVMIFAACSAGFFAWLTGSPFILGDMGYSPN 241
           + ++T     ++   +    +LK+R F  NV IF ACSA FF +LT  P ++   GY+  
Sbjct: 189 KESRT----RSQSEPILVKNILKNRAFQNNVAIFGACSAAFFCYLTLWPAVMQHHGYAAA 244

Query: 242 DIGLSYVPQTLAFLLGGYGCRTALNRMNGNTLLPWLLVVYGVSMVALYLVATLTQPTLTT 301
           +IGLS++PQTLAF+LGG+ C+ AL+  +   +   L+  + V  + L+L+  L    L  
Sbjct: 245 EIGLSFIPQTLAFMLGGFACKKALHSHSPEAIKNMLITGFVVLSLVLFLLTQLGAGILAV 304

Query: 302 LLIPFCVMALVNGAIYPIVVANALTPFPEGTGKAAALQNTLQLGLCFVASMLVS--AFIA 359
           L + F  +A +NGA+YP++V +AL PF     KAA  QN LQLG+ F+AS  V+  A   
Sbjct: 305 LWV-FAALAAINGAVYPLLVTDALAPFSNNATKAAGWQNFLQLGMAFIASAAVALIAHWF 363

Query: 360 QPLLATVTVMVSTVVLAA 377
           +  + T  ++ + +VL A
Sbjct: 364 EKAIGTGILVCAAIVLVA 381