Pairwise Alignments

Query, 403 a.a., Bcr/CflA family multidrug efflux MFS transporter from Serratia liquefaciens MT49

Subject, 430 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella loihica PV-4

 Score =  298 bits (764), Expect = 2e-85
 Identities = 168/392 (42%), Positives = 241/392 (61%), Gaps = 17/392 (4%)

Query: 5   FGFMFYLAGLSMLGYLATDMYLPAFGMMQQDLQISAGAISASLSIFLAGFAFAQLLWGPL 64
           F F+ YLA LSMLG++ATDMYLPAF  ++  L  SA  +++SL+ FLAG A  QLL+GPL
Sbjct: 7   FSFLIYLALLSMLGFIATDMYLPAFKAIETSLDASATQVASSLTFFLAGLALGQLLYGPL 66

Query: 65  SDRLGRKPVLLIGLALFALGCLGMLWVQNAVQLWSLRFIQAIGVCSAAVTWQALVIDRYR 124
              +G++  L++GL LF    L +    +       RF QA+G CSA+V WQA+VIDRY+
Sbjct: 67  VQAIGKRLSLVLGLVLFGAASLVIANSDSIAMFNVARFFQALGACSASVIWQAIVIDRYK 126

Query: 125 EGKANRVFATIMPLVALSPALAPLVGAWLLNHMGWRAIFAVLLGITVLLLLPTLLLKESA 184
             +A +VF+ IMPLVALSPALAP++GA+LL    W +IF +L G+++LL+L TL   ES 
Sbjct: 127 ASEAQQVFSNIMPLVALSPALAPILGAYLLEWQQWHSIFFILGGLSLLLILATLAWVESK 186

Query: 185 KTVPSDDN--------------KKSALSFFQLLKSRIFSGNVMIFAACSAGFFAWLTGSP 230
           +++ S  +              K   +S+  +L S  + GNV+IF ACSA FF++LT  P
Sbjct: 187 ESLNSKADEAISQQGSTDTQVQKSVRVSYLAMLASPRYLGNVLIFGACSAAFFSYLTLWP 246

Query: 231 FILGDMGYSPNDIGLSYVPQTLAFLLGGYGCRTALNRMNGNTLLPWLLVVYGVSMVALYL 290
            ++   GY    IGLS++PQT+ F+LGGY  +  + R+     L W+L+++G  +  + L
Sbjct: 247 IVMEQHGYEAKAIGLSFIPQTVMFILGGYLSKLFIRRLGAEVTLTWVLLLFGACVAGIAL 306

Query: 291 VATLTQP--TLTTLLIPFCVMALVNGAIYPIVVANALTPFPEGTGKAAALQNTLQLGLCF 348
           V TL  P  T+  LL  F VMA  NGA YPIVV +AL  F + + KAA LQN LQ+ + F
Sbjct: 307 V-TLCYPSSTIWPLLSIFSVMAAANGACYPIVVNSALQVFKQASAKAAGLQNFLQISIAF 365

Query: 349 VASMLVSAFIAQPLLATVTVMVSTVVLAALGY 380
            AS LV+ + +    A    +V + +   +G+
Sbjct: 366 GASSLVALWASSGEKAIGVGIVVSAIGVLIGF 397