Pairwise Alignments

Query, 403 a.a., Bcr/CflA family multidrug efflux MFS transporter from Serratia liquefaciens MT49

Subject, 423 a.a., inner membrane transport protein YdhC (RefSeq) from Shewanella sp. ANA-3

 Score =  314 bits (804), Expect = 4e-90
 Identities = 166/387 (42%), Positives = 246/387 (63%), Gaps = 3/387 (0%)

Query: 5   FGFMFYLAGLSMLGYLATDMYLPAFGMMQQDLQISAGAISASLSIFLAGFAFAQLLWGPL 64
           F F+FYLA LSMLG++ATDMYLPAF  ++     +   ++ SL+ FLAG A  QL++GPL
Sbjct: 14  FIFLFYLALLSMLGFIATDMYLPAFKAIESSFNSTPSQVAMSLTCFLAGLALGQLIYGPL 73

Query: 65  SDRLGRKPVLLIGLALFALGCLGMLWVQNAVQLWSLRFIQAIGVCSAAVTWQALVIDRYR 124
             +LG++  L++GL +FAL  + +    + + L   RF QA+G CSA V WQA+V+++Y 
Sbjct: 74  VSKLGKRYALILGLGIFALASVAIANSDSILMLNIARFFQAVGACSAGVIWQAIVVEQYD 133

Query: 125 EGKANRVFATIMPLVALSPALAPLVGAWLLNHMGWRAIFAVLLGITVLLLLPTLLLKESA 184
             KA  +F+ IMPLVALSPALAP++GA++LN  GWRAIF  L  I  LL+L TL    S 
Sbjct: 134 AEKAQGIFSNIMPLVALSPALAPILGAYILNDFGWRAIFISLCVIAFLLVLMTLYFVPS- 192

Query: 185 KTVPSDDNKKSALSFFQLLKSRIFSGNVMIFAACSAGFFAWLTGSPFILGDMGYSPNDIG 244
                 D + SA+S+ Q+LK+  + GNV+IF ACS  FFA+LT  P ++   GY   +IG
Sbjct: 193 -HAEHQDTRPSAVSYGQILKNTRYLGNVVIFGACSGAFFAYLTVWPIVMEQHGYQATEIG 251

Query: 245 LSYVPQTLAFLLGGYGCRTALNRMNGNTLLPWLLVVYGVSMVAL-YLVATLTQPTLTTLL 303
           LS++PQT+ F++GGY  +  + R+  +  L  LL ++G+ ++++ +    +   T+  LL
Sbjct: 252 LSFIPQTIMFIVGGYASKLLIKRIGADRTLNVLLAIFGLCVISIVFFTLLMKAETIFPLL 311

Query: 304 IPFCVMALVNGAIYPIVVANALTPFPEGTGKAAALQNTLQLGLCFVASMLVSAFIAQPLL 363
           I F ++A  NGAIYPIVV +AL  F +   KAA LQN LQ+ + F AS LV+ + +   +
Sbjct: 312 ISFSILAAANGAIYPIVVNSALQQFTQNAAKAAGLQNFLQITIAFGASSLVALWASSGEV 371

Query: 364 ATVTVMVSTVVLAALGYLMQRRKVMDD 390
           A    ++S  ++  LGYL++  +   D
Sbjct: 372 AIGWGILSCSLVVILGYLLKTEQTWAD 398