Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Serratia liquefaciens MT49

Subject, 461 a.a., MATE efflux family protein (RefSeq) from Shewanella loihica PV-4

 Score =  469 bits (1207), Expect = e-137
 Identities = 235/453 (51%), Positives = 323/453 (71%), Gaps = 2/453 (0%)

Query: 1   MQKYFIEARSLLALAIPVIIAQISQTAMGVVDTIMAGAYSATDMAAVAVGTSIWLPAILF 60
           M ++  +A+ L+ LA+PV+IAQ++QT MG +DT+MAG  SA DMAAVA+G S+WLPA+LF
Sbjct: 1   MNQFGFQAKKLVHLALPVLIAQVTQTMMGFIDTVMAGRVSALDMAAVAIGGSLWLPALLF 60

Query: 61  GHGLLLALTPVIAQLNGAGRRDRIAHQVRQGFWLAGAVSLLVIIVLYNSKFVIDLMHNID 120
             GLL+A TPV A  +GA  ++ I     Q  ++A   + +VI +L  +  +  LM ++ 
Sbjct: 61  VQGLLVAFTPVFASHHGADNQNAIRPMAFQAAYIAIIGAAVVISILLFAPQIFKLM-DLS 119

Query: 121 PQLADKAVGYLHAIMWGAPGYLFFQVLRGQCEGLSKTKPGMVIGFLGLLVNIPINYIFIY 180
           P+LA+ +V YLH   WG P ++ +QVLRG  EG+S T P MVIGF+GL VNIP NYIFIY
Sbjct: 120 PELAELSVSYLHGFAWGVPAFVLYQVLRGCSEGISYTLPTMVIGFVGLAVNIPANYIFIY 179

Query: 181 GKFGMPELGGVGCGVATGSVYWFMFLAMRWYVKRAPSQRDILPHEGSSPRPDWPAIRRLF 240
           G  G P LGG GCG+AT  V+W MF+AM  Y++       I P  G+   PD   ++R+ 
Sbjct: 180 GHLGAPALGGAGCGIATALVFWAMFIAMTIYMQWHKRFAVIKPL-GAFHLPDLKTMKRMT 238

Query: 241 GIGLPVALALFFEVTLFAVVALLVSPLGIVSVAGHQIALNFSALMFVLPMSLGVSATIRV 300
             G+P+A+ALFFEV+LFA++ALL++PLG   VAGHQIALNFS+++F+LP+S+G++ +IRV
Sbjct: 239 KHGMPIAMALFFEVSLFAIIALLLAPLGADVVAGHQIALNFSSIVFMLPLSIGIAVSIRV 298

Query: 301 GYRLGEGSVEGARIAAYSAIGVGILMACCTALFTATFREQIALLYNDSPAVVAMASQLML 360
           GY LG+   + A++     + +   +A CTA+ T  FR QIALLYN +P VVA+AS LM 
Sbjct: 299 GYYLGQYKADVAKLVTKVGLAIAFSLAACTAVITVVFRTQIALLYNQNPEVVALASSLMF 358

Query: 361 LAAIYQISDSIQVIGSGVLRGYKDTRSIFFITFIAYWVLGLPSGYLLALTDIVVPAMGPS 420
           LAA+YQ+SDS+QV+ +G LRGY DTRS F+IT ++YW +G+  GYLLA TDI+VPAMG  
Sbjct: 359 LAALYQLSDSVQVVTAGALRGYHDTRSAFYITLVSYWAIGMVLGYLLAETDILVPAMGAH 418

Query: 421 GFWIGFIIGLTFAAIMMALRMRWLQKQPATLIL 453
           GFWIG I GLT AA++ ALR++++QK P  L L
Sbjct: 419 GFWIGLIAGLTSAALLFALRLQYIQKHPKQLAL 451