Pairwise Alignments

Query, 458 a.a., MATE family efflux transporter from Serratia liquefaciens MT49

Subject, 452 a.a., putative transport protein, multidrug efflux protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  180 bits (456), Expect = 1e-49
 Identities = 126/450 (28%), Positives = 215/450 (47%), Gaps = 20/450 (4%)

Query: 9   RSLLALAIPVIIAQISQTAMGVVDTIMAGAYSATDMAAVAVGTSIWLPAILFGHGLLLAL 68
           ++L++L +P++I QI    +G  DT+M G +S  ++ A +   +++   I+F  G    L
Sbjct: 13  KALISLGLPIVIGQIGVIVLGFADTLMIGHHSTIELGAASFVNNVFNLVIIFSTGFSYGL 72

Query: 69  TPVIAQLNGAGRRDRIAHQVRQGFWLAGAVSLLVII---VLYNSKFVIDLMHNIDPQLAD 125
           TP++  L G  +       +R        V+ L+ I   VLY +   +     + P +  
Sbjct: 73  TPIVGGLYGTHQYASAGQALRNSLLANLLVAFLLTIGMTVLYFNVGNLGQPEELIPLIKP 132

Query: 126 KAVGYLHAIMWGAPGYLFFQVLRGQCEGLSKTKPGMVIGFLGLLVNIPINYIFIYGKFGM 185
             +  L ++++     + F   +   +G++ TK  M I   G ++NI  NYI IYGK G+
Sbjct: 133 YYLVLLASLVF----VMLFNGFKQFTDGITDTKTAMWILLGGNVLNIIGNYILIYGKLGL 188

Query: 186 PELGGVGCGVATGSVYWFMFLAMRWYVKRAPSQRDILPHEGSSPRPDWPA--IRRLFGIG 243
           PE+G +G G++T      M +       R+P     L  +    R  W      RL  +G
Sbjct: 189 PEMGLLGAGISTLFSRIMMVVVFIIVFMRSPR---FLRFKLGFYRLGWSKAIFGRLNSLG 245

Query: 244 LPVALALFFEVTLFAVVALLVSPLGIVSVAGHQIALNFSALMFVLPMSLGVSATIRVGYR 303
            P+A  +  E   F++ A+++  LG +++A HQ+ L  S   F++   +G +  +RV   
Sbjct: 246 WPIAFQMGMETASFSLSAVMIGWLGTIALASHQVMLAISQFTFMMYYGMGAAVAVRVSNF 305

Query: 304 LGEGSVEGARIAAYSAIGVGILMACCTALFTATF--REQIALLYNDSPAVVAMASQLMLL 361
            G+G +   R +AY+  G  ++MA    L +  F  R  +   + DS  V AM + L+L 
Sbjct: 306 NGQGDILNVRRSAYA--GFHLMMALGVVLSSIVFLCRNYLGGWFTDSTEVAAMVTSLILP 363

Query: 362 AAIYQISDSIQVIGSGVLRGYKDTRSIFFITFIAYWVLGLPSGYLLALTDIVVPAMGPSG 421
             +YQ  D +Q+  +  LRG  D + +  I FIAY+++ LP GY        V   G  G
Sbjct: 364 FLVYQFGDGLQITFANALRGISDVKLMMLIAFIAYFLISLPVGYFCGF----VLEWGIIG 419

Query: 422 FWIGFIIGLTFAAIMMALRMRWLQKQPATL 451
            W+ F  GLT A +M+  R     K P ++
Sbjct: 420 VWMAFPFGLTSAGLMLWWRFHHKTKLPPSI 449