Pairwise Alignments

Query, 430 a.a., Fe-S cluster assembly protein SufD from Serratia liquefaciens MT49

Subject, 447 a.a., conserved hypothetical protein, putative ABC transporter permease component (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  141 bits (355), Expect = 5e-38
 Identities = 118/432 (27%), Positives = 199/432 (46%), Gaps = 34/432 (7%)

Query: 16  LYSLFEERGGEHSAHAL-----AHWQQALRLGWPTRKHENWKYTPLEGLLEQQF------ 64
           L+S  E    +HSA  L     A +    RLG+PTRK E +KYT +    E  +      
Sbjct: 10  LFSQTEAMICKHSAEVLNAPRAAAFADFERLGFPTRKMEKYKYTDISKYFEPDYGLNLNR 69

Query: 65  LEPPVEQVTTAQVDALALAIDAYRLVFIDGRFSAALSDGELGDYQFDVASYGTPQALPEP 124
           L+ PV      + D   ++   Y  V  D  ++ AL    L +     +        PE 
Sbjct: 70  LQIPVNPYEVFKCDVPNMSTALY-FVVNDAFYNKALPKTHLPEGVIFGSLKEVAAEHPEL 128

Query: 125 IQP----------EIFLHLTESLAQETSIIRVAAGKSASRPLYLLHISSGRGAAGEVNTV 174
           ++           +       + AQ+  I  V       +P+ L++I        +VN +
Sbjct: 129 VKKYYGKLADTSKDGITAFNTAFAQDGVIFYVPKNVIVEKPIQLVNI-----LRADVNFM 183

Query: 175 HHRHHL---EIGRSAQAEVIEHYVSLNDAAHFTGARLTANVA-DNAQLHHCKLAFESQPS 230
            +R  L   E G  A+  + +H +   D  +F   ++    A +NA     +L      +
Sbjct: 184 VNRRVLIILEDGAQARLLICDHAM---DNVNFLATQVIEVFAGENAVFDMYELEETHTST 240

Query: 231 YHFAHNDLVIGRDAQVKSDSFLLGAGLTRHNTSAQLNGEGSNLVINSLVLPVGKEVCDTR 290
              ++  +    ++ V  +   L  G TR+ T   L GEG+ + +  + +    +  D  
Sbjct: 241 VRISNLYVKQEANSNVLLNGMTLHNGTTRNTTEVLLAGEGAEINLCGMAIADKNQHVDNN 300

Query: 291 TYLEHNKGYCESRQLHKVVVSDRAKAVFNGMIKVAKHAIKTDGQMTNHNLLLGKVAEVDT 350
           T ++H    C S +L K V+ D++   F G++ V   A  T+ Q TN NL   + A + T
Sbjct: 301 TSIDHAVPNCTSNELFKYVLDDQSTGAFAGLVLVRPDAQHTNSQQTNRNLCATRDARMYT 360

Query: 351 KPQLEIYADDVKCSHGATVGRIDEEQLFYLQSRGIDKHAAQQMIIFAFAAELTEGIGNET 410
           +PQLEIYADDVKCSHGATVG++DE  LFY+++RGI +  A+ +++FAF  E+ + I  + 
Sbjct: 361 QPQLEIYADDVKCSHGATVGQLDENALFYMRARGIAEKEARLLLMFAFVNEVIDTIRLDA 420

Query: 411 IRESVLARIARR 422
           +++ +   + +R
Sbjct: 421 LKDRLHLLVEKR 432