Pairwise Alignments

Query, 395 a.a., efflux RND transporter periplasmic adaptor subunit from Serratia liquefaciens MT49

Subject, 395 a.a., RND family efflux transporter, MFP subunit from Dechlorosoma suillum PS

 Score =  293 bits (750), Expect = 6e-84
 Identities = 148/349 (42%), Positives = 239/349 (68%), Gaps = 3/349 (0%)

Query: 45  AAPPPPAVSAADVVIKPISQWDTFNGRIEAVQSVQLRPRVSGYIDKVNYTEGDEVKKGQV 104
           AAP   +V  A+V  +P++ W +++GR+EAV+ V+LRP+VSG +  V++ +G  VKKG +
Sbjct: 38  AAPAAASVEVAEVASRPVTDWQSYSGRLEAVERVELRPQVSGVLTAVHFKDGSLVKKGDL 97

Query: 105 LFTIDDRTYRAAREQAQAELVRARNQAALARSESSRTEKLIGSQAISTEVWEQRRSSAAQ 164
           LF+ID R + A   +AQA+L  A  +AA   ++ +R E+L+   A+S   +E+++++A +
Sbjct: 98  LFSIDPRPFAAEVARAQAQLAGAEARAAYTGADLARGERLLAENAVSRRDFEEKQNAARE 157

Query: 165 AQSNVLAAQAQFDMAQLNLDFTRVIAPIDGRASRAMITAGNLVTAGDSASVLTTLVSLDK 224
           A + + AAQA   +A+LNL++TR+ API GR SRA +T GNLV  G++A  LTTLVS D 
Sbjct: 158 AAATLKAAQAALKVAELNLEYTRITAPISGRMSRAEVTVGNLVAPGNAAP-LTTLVSADS 216

Query: 225 VYVYFDVDEATFLRYQNDGRRTAKLPVKVGLVGEDGYPHQGVVDFTDNQLNAGTGTIRMR 284
           +Y  FDVDE ++L+Y + G +   LP+++GL  E G+  +G +   DN+L++ +GTIR+R
Sbjct: 217 IYAAFDVDEQSYLKYVS-GSQGKGLPIRMGLADESGHGREGRLSSVDNRLDSTSGTIRLR 275

Query: 285 ALLENAERRFTPGLFARVQMPGSAVFNAMLIDDKSVMTDQDRKFVYIVDKDGKAQRRDIE 344
           A+ +N + R  PGL+ARV++   A   A+L+D+K+V TDQD++FV +VD   +   R++ 
Sbjct: 276 AVFDNPDGRLVPGLYARVRLGSEAPREAVLVDEKAVGTDQDKRFVLVVDGKNRTAYREVR 335

Query: 345 VGRVADGLRIVRKGLSAGDRVIVDGMQKVFMPGMPVAAKTVAINADASA 393
           +G V +GLR+V  GL AG+R++V+G+Q+V  PG  VA + V++    +A
Sbjct: 336 LGAVQEGLRVVESGLKAGERIVVNGLQRV-RPGDEVAPQMVSMGGRETA 383