Pairwise Alignments

Query, 194 a.a., penicillin-binding protein activator LpoB from Serratia liquefaciens MT49

Subject, 197 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.9 bits (128), Expect = 2e-12
 Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 80  NPGSVLLLDSVKNNTNGALQTAKATSALHKALASNQTFSIVPEAQLVSAKQTLGLSADDS 139
           N   +L +DS+KN T+  + T   T ++   L  +  F  +   ++ S ++ L    +  
Sbjct: 66  NNRPILFVDSIKNKTSEHIDTESVTDSISNKLLRSGKFRFIDMTKVDSVRKQLDYQNNTG 125

Query: 140 LGSRSKAIGLARIVSAQYVLYSDVSGDVKSP--------TLDMQLMLVQTGEIVWSGNGT 191
           +   S AI   R + AQY+LY ++S  VK           + M+LM ++TG I WS    
Sbjct: 126 MVDPSTAIKFGRQIGAQYMLYGNLSSIVKQDGSTKDVYYKMTMRLMDLETGLIEWSDEKE 185

Query: 192 VK 193
           ++
Sbjct: 186 IR 187