Pairwise Alignments

Query, 317 a.a., ketoacyl-ACP synthase III from Serratia liquefaciens MT49

Subject, 330 a.a., 3-oxoacyl-(acyl-carrier-protein) synthase III (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  240 bits (613), Expect = 3e-68
 Identities = 135/322 (41%), Positives = 188/322 (58%), Gaps = 11/322 (3%)

Query: 7   GTGSYLPVQVRTNADLEKMVDTSDEWIVTRTGIRERRIAAADETVATMGFHAAEKALEMA 66
           G G+Y P ++ TNAD+E MV+T+DEWI TRTGIR+R + A  +T + +   AA  AL  A
Sbjct: 9   GFGAYAPERILTNADIESMVETTDEWITTRTGIRQRHVVAPGQTTSDLAVEAARAALADA 68

Query: 67  GVAKEDIGLIVVATTTSSHAFPSSACQVQQMLGIKDCAAFDLAAACAGFTYALSVADQYV 126
            +   DI  ++VAT T   + P++AC V + LG+    A D  AAC+GF Y L +A   V
Sbjct: 69  ALDTADITHVLVATCTPDASCPNTACIVARKLGMTGVMALDCNAACSGFLYGLELAQGIV 128

Query: 127 KNGAVKRALVIGADVLSRTLDPDDRGTIILFGDGAGAVV----LGASEEPGILSTHL-HA 181
                 R L++ A+ LS   +  DR T +LFGDGAGA V    + A++   +L   +  +
Sbjct: 129 AARPASRVLLVAAEALSLRCNWKDRTTCVLFGDGAGATVVTADVDATQGTAVLEDSIVTS 188

Query: 182 DGTYGGLLTL------PFKDRQDQEKPAYVTMAGNEVFKVAVTELAHIVDETLQANDLDR 235
           DG+ G LLT+      P+       +  +V M G +VFK AV  +  + ++ L  N    
Sbjct: 189 DGSLGDLLTIGGGTANPYAIGDSVGEEYFVRMQGRDVFKHAVRSMTQVCNDLLARNGFTT 248

Query: 236 SQLDWLVPHQANLRIISATAKKLGMGMDKVVVTLDRHGNTSAASVPAALDEAVRDGRIQR 295
             +D ++PHQANLRII A   +LG   +KV V +   GNTSAAS+P AL +A   GRI+ 
Sbjct: 249 EDVDLVIPHQANLRIIEAVGDRLGFASEKVFVNVHDFGNTSAASIPLALADARAQGRIRP 308

Query: 296 GQLVLLEAFGGGFTWGSALVRF 317
           G  VLL  FGGGFTWG+AL+RF
Sbjct: 309 GMRVLLTTFGGGFTWGAALLRF 330