Pairwise Alignments

Query, 173 a.a., 23S rRNA accumulation protein YceD from Serratia liquefaciens MT49

Subject, 174 a.a., 23S rRNA accumulation protein YceD from Vibrio cholerae E7946 ATCC 55056

 Score =  162 bits (409), Expect = 4e-45
 Identities = 81/174 (46%), Positives = 112/174 (64%), Gaps = 2/174 (1%)

Query: 1   MQKVKLPLTIDAVRTAQKRLDYVGSYAPEQVTRVAASVVSVDSDVEVSLSFDIDNQRLAV 60
           MQKVK+P T+D  + AQKRLD+ G        R+  SV  V  D EVSLSF+ID Q+L V
Sbjct: 1   MQKVKIPRTVDPAKAAQKRLDFDGIIQVNLFKRLEESVAGVKRDAEVSLSFEIDEQQLVV 60

Query: 61  ITGHADVQVMLMCQRCGVPFEHHVHTTYCFSPVVNDEQAEALPGAYEPIEVDEFGEVDLL 120
           I+G A+++V L CQRC   F H     + ++P +  +  E  P  Y+ ++++EFGEVDL+
Sbjct: 61  ISGKANIEVDLECQRCNEVFAHECEVEFTYTPYLGRKSEEDAPDEYDLVDLNEFGEVDLV 120

Query: 121 AMIEDEIILSLPVVPVHESEHCEVSEADMVFGKLPPEA--EKPNPFAVLASLKR 172
            ++EDE IL+LP V +H+   C V   ++VFG+LP E   EKPNPF VL SLK+
Sbjct: 121 QLVEDEFILNLPQVAMHDEADCSVDSDNLVFGELPEEVLEEKPNPFDVLKSLKK 174