Pairwise Alignments

Query, 253 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 266 a.a., AraC-type DNA-binding domain-containing proteins from Pseudomonas stutzeri RCH2

 Score =  152 bits (384), Expect = 7e-42
 Identities = 85/220 (38%), Positives = 126/220 (57%)

Query: 28  PLHYHDCAQLIHSLSGVVQVNTRLGSWVVPPGRGVWLPARVEHSLQITGKVAARALLVDP 87
           P H H  AQL +++SGV++V+T  G ++ PP R + +P  + H +  + +   R+L +D 
Sbjct: 38  PRHNHPWAQLSYAISGVLRVHTERGRFLAPPQRAILIPPGLLHEVISSPQTEMRSLYIDQ 97

Query: 88  LARADLPASCEVVQISPLLRELIICAMDITADYPAGGREERIMELILDELRVLPILPLNL 147
                 PA C+V+ +SPLLRELI     +  DY   G + R+  +ILD+LR  P L  +L
Sbjct: 98  RVVPWAPAHCQVLAVSPLLRELIRTFGTLPVDYDEQGADGRLAAVILDQLRAAPELSYSL 157

Query: 148 PEPRSDALLKLCRHIQQSLAHPWELEQAASYINVSGRTLSRRFQRETGLRFGDWVRRARL 207
           P P    L  +C  + +       L Q +  +++S +TL+R+FQR+TGL F  W +R RL
Sbjct: 158 PWPDDARLRGICEALYEQPDLSLSLAQWSERLHISEKTLTRQFQRDTGLSFRAWRQRLRL 217

Query: 208 LAALNALAAGHSVLEVALDLGYDSPSAFSAMFRRQLGVAP 247
           L+AL  L  G  V +VAL  GY+S SAF A F +Q G  P
Sbjct: 218 LSALPLLERGQPVTDVALACGYESTSAFIAAFGQQFGTTP 257