Pairwise Alignments

Query, 253 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 261 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  139 bits (349), Expect = 8e-38
 Identities = 89/244 (36%), Positives = 125/244 (51%), Gaps = 3/244 (1%)

Query: 10  ANRSIVPVAKDYQHGEF-EPLHYHDCAQLIHSLSGVVQVNTRLGSWVVPPGRGVWLPARV 68
           A+  IV  A   Q  E   P H+H   QL  S  G+V V+   G WVVP    VWLP   
Sbjct: 14  ADGPIVIAAAGSQGRELVSPPHHHARGQLFGSTRGLVSVSVEAGVWVVPAIHAVWLPPNH 73

Query: 69  EHSLQITGKVAARALLVDPLARADLPASCEVVQISPLLRELIICAMDITAD--YPAGGRE 126
            H  +  G     ++ + P A  DLP+S   ++ S LLRE ++ A     +   P   ++
Sbjct: 74  VHWGRSHGPFDGWSVYIAPAACQDLPSSPCTIRTSGLLREAVLRAATWPLEPFVPLDEQK 133

Query: 127 ERIMELILDELRVLPILPLNLPEPRSDALLKLCRHIQQSLAHPWELEQAASYINVSGRTL 186
             +  ++LDE+R LP+ P  LP PR   L ++ R +    A   + E  A +  +S R+L
Sbjct: 134 AHVAAVLLDEIRNLPVEPFGLPLPRDPRLERIARALIADPADERDFEAWARWAAISPRSL 193

Query: 187 SRRFQRETGLRFGDWVRRARLLAALNALAAGHSVLEVALDLGYDSPSAFSAMFRRQLGVA 246
            RRF  ETG  F  W +RARL+ +L  LA    V  +ALDLGY + SAF ++FRR  G  
Sbjct: 194 GRRFVTETGFTFTAWRQRARLMRSLEMLATDLPVTTIALDLGYATASAFISLFRRTFGET 253

Query: 247 PSTY 250
           P+ Y
Sbjct: 254 PAVY 257