Pairwise Alignments

Query, 253 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 278 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  148 bits (374), Expect = 1e-40
 Identities = 87/232 (37%), Positives = 123/232 (53%), Gaps = 2/232 (0%)

Query: 20  DYQHGEFE-PLHYHDCAQLIHSLSGVVQVNTRLGSWVVPPGRGVWLPARVEHSLQITGKV 78
           D+   E E P H H   QLI +L G V      G W+VPPG  VW+P  V HS Q+T   
Sbjct: 34  DFSDYEAEVPHHRHRQGQLIMALHGAVTCTAANGLWIVPPGSAVWIPGGVSHSNQVTANA 93

Query: 79  AARALLVDPLARADLPASCEVVQISPLLRELIICAMDITADYPAGGREERIMELILDELR 138
               L V+P A A LP  C  + +SP+LRE+I+   D +          R++ ++LDEL 
Sbjct: 94  RLSYLFVEPEA-ALLPQDCCTLSVSPMLREMILRLADASGHDEPKDHRGRLVRVMLDELA 152

Query: 139 VLPILPLNLPEPRSDALLKLCRHIQQSLAHPWELEQAASYINVSGRTLSRRFQRETGLRF 198
           ++P   L LP      +  +   +         L + AS++ +S R+L R   +ETGL F
Sbjct: 153 LMPTGGLKLPVSHHPKIAMIASALAAQPGDRRTLMEWASHVAMSERSLKRLMIQETGLSF 212

Query: 199 GDWVRRARLLAALNALAAGHSVLEVALDLGYDSPSAFSAMFRRQLGVAPSTY 250
           G W R+  L+ AL  LA+G SV  V+L LGY+S +AF  MF++ LG  P+ Y
Sbjct: 213 GRWRRQLHLIVALRELASGASVQSVSLSLGYESATAFIVMFKKALGTTPARY 264