Pairwise Alignments

Query, 253 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 247 a.a., Transcriptional Regulator, AraC family (NCBI) from Rhodospirillum rubrum S1H

 Score =  198 bits (504), Expect = 8e-56
 Identities = 104/224 (46%), Positives = 142/224 (63%)

Query: 28  PLHYHDCAQLIHSLSGVVQVNTRLGSWVVPPGRGVWLPARVEHSLQITGKVAARALLVDP 87
           P H H+ AQL++++SGVV + T  G+WVVPP R VWLP ++EH       V  R+LL+DP
Sbjct: 24  PTHSHEEAQLLYAVSGVVSIKTDKGTWVVPPSRAVWLPPKLEHETTSRAGVQFRSLLIDP 83

Query: 88  LARADLPASCEVVQISPLLRELIICAMDITADYPAGGREERIMELILDELRVLPILPLNL 147
                LP +C VV+I+ LLRELI+   ++     +  R + ++ L L EL   P  PLNL
Sbjct: 84  NGIQGLPDACMVVEITSLLRELILKLAELAKTPGSRERTDAVVRLFLMELSFQPAQPLNL 143

Query: 148 PEPRSDALLKLCRHIQQSLAHPWELEQAASYINVSGRTLSRRFQRETGLRFGDWVRRARL 207
           P P    L +LC  +++ LA    +E AA+ + +S  T  R F+RETG+ FG W ++AR+
Sbjct: 144 PTPTHPDLARLCAKMREDLAEGVSVEDAAAMLYMSRATFMRFFKRETGMSFGHWRQQARM 203

Query: 208 LAALNALAAGHSVLEVALDLGYDSPSAFSAMFRRQLGVAPSTYF 251
           L AL  LA G S+L+VAL+ GY SPSAFSA+FRR LG  PS YF
Sbjct: 204 LDALVLLADGRSILDVALECGYSSPSAFSAIFRRSLGRPPSAYF 247