Pairwise Alignments

Query, 646 a.a., MacB family efflux pump subunit from Serratia liquefaciens MT49

Subject, 238 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  201 bits (510), Expect = 4e-56
 Identities = 109/218 (50%), Positives = 146/218 (66%), Gaps = 1/218 (0%)

Query: 4   IIELKGIGRTYTNSSEPLTVLKNINLKIAAGELVAIIGASGSGKSTLMNIIGCLDVPDQG 63
           +I+L  I +TY N + PL VLK INL I  GE V+I+GASGSGKSTL+NI+G LD  D G
Sbjct: 1   MIKLTDINKTYNNGA-PLHVLKGINLDIQRGEFVSIMGASGSGKSTLLNILGILDNYDTG 59

Query: 64  DYFISGHNAAHLSPDELARLRREHIGFIFQRYHLMPDISALGNVEIPAIYANSKRDQRRL 123
           DY+++      LS  + A  R   IGFIFQ ++L+    A+ NV +P  Y    R +R  
Sbjct: 60  DYYLNNVLIKDLSETKAAEYRNRMIGFIFQSFNLISFKDAVENVALPLFYQGVSRKKRNA 119

Query: 124 RAAQLLARLGLEGREHHKPGQLSGGQQQRVSIARSLINGGEIILADEPTGALDSKSGQEV 183
            A + L RLGL+   HH P ++SGGQ+QRV+IAR+LI   +IILADEPTGALDSK+  EV
Sbjct: 120 LALEYLDRLGLKEWAHHMPNEMSGGQKQRVAIARALITQPQIILADEPTGALDSKTSVEV 179

Query: 184 LAILSELNQRGHTVVIVTHDMKVAQHAQRIIELQDGEI 221
           + IL +L++ G T+V+VTH+  VA    +II ++DG I
Sbjct: 180 MQILKDLHRMGMTIVVVTHESGVANQTDKIIHIKDGII 217