Pairwise Alignments

Query, 711 a.a., TIGR01666 family membrane protein from Serratia liquefaciens MT49

Subject, 732 a.a., hypothetical membrane protein, TIGR01666 from Pseudomonas stutzeri RCH2

 Score =  528 bits (1360), Expect = e-154
 Identities = 294/719 (40%), Positives = 429/719 (59%), Gaps = 14/719 (1%)

Query: 3   SFAPAIRRYAYNSNLLYDLRIFIALAGAAAVPWWLGIPKLTIPLTLGVVAAALTDLDDRL 62
           S + ++RR        Y LR+ IA+AG+  + W+LG P L IPL LG++A+AL + DD  
Sbjct: 5   SLSQSLRRLWALEKFGYSLRVLIAMAGSMGLSWYLGQPTLIIPLFLGIIASALAETDDSW 64

Query: 63  TGRLRNLLITLVCFFVASASIELLFPYPWLFALGLTTSTCGFILLGALGQRYATIAFGAL 122
            GRL  LL+TL+CF +A+ ++ELLFPYPWLF  GL  ST   ++LGALG+RY  IA   L
Sbjct: 65  LGRLNALLVTLLCFSIAAVAVELLFPYPWLFVAGLAVSTFALVMLGALGERYGAIAQATL 124

Query: 123 LIAVYTMLGTSMYDA----WYQQPMLLIIGALWYNLLTLIGHLIFPIRPLQENLARCYDQ 178
           ++A+Y+M+     +     +++ P+LL+ GA WY LL++  + +F  +P+Q++LAR Y +
Sbjct: 125 ILAIYSMIAADQRNGELQHFWRDPLLLVAGAAWYGLLSVCWNALFAHQPVQQSLARLYRE 184

Query: 179 LANYLDAKANLFDPDAEQDADLPWMDVAMANSTLVTILNQTKASLLTRLKGDRGQRGTRR 238
           L  Y   KA LF+P  + D +   +++A  N  +V  LN  K +LL RL   R       
Sbjct: 185 LGLYFRYKAALFEPVRQLDVEQRRLELAQQNGRVVNALNAAKETLLHRLGNGRAGGKINH 244

Query: 239 TLHYYFVAQDIHERASSAHVQYQALSRQFRHSDILFRFQRLLSMQARACQQLAQSILMRQ 298
            L  YF+AQD+HER SS+H  YQAL+  F HSD+LFR QRLL +QA AC +L ++I +RQ
Sbjct: 245 YLKLYFLAQDLHERVSSSHYPYQALAEAFFHSDVLFRCQRLLRLQASACAELGETIQLRQ 304

Query: 299 KYQHNVRFEPAFARIDEALA--RVTLTPENRELTKALSHLLKNLRAIDAQLANIESEQAL 356
            ++++     A   +  +L   R    P  R L ++L  L  NL  +  QLA+      L
Sbjct: 305 AFRYSEANGQALEDLQASLEHLREQNNPAWRGLLRSLRALSGNLSTLQRQLASASDPGTL 364

Query: 357 ANGQVEENSLSDDRLTGWSDIRLRISRHLTPQSALFRHAIRMSVVLCIGYAFIQFTGMQH 416
              Q  +NSL D +     +   RI   LTP S LFRHA+RM++ L  GYA +     + 
Sbjct: 365 EGEQ--DNSLLDRQPQTLREAFNRIRLQLTPTSLLFRHALRMTIALITGYAVLHAIHPEQ 422

Query: 417 GYWILLTSLFVCQPNYNATRRRLALRIIGTLAGILVGLPILYFVPSVEGQLVLIVISGVL 476
           GYW+LLT++FVCQPNY ATR +L  RI GT+ G++ G  +    PS   Q +  V++GV+
Sbjct: 423 GYWVLLTTVFVCQPNYGATRIKLVQRISGTVLGLVAGWALFDLFPSQPIQALFAVVAGVV 482

Query: 477 FFAFRTVQYAHATMFITLLVLLCFNLLGEGFEVAAPRVYDTLLGCAIAWAAVSFIWPDWK 536
           FFA R+ +Y  AT  ITL+VL CFN +G+G+ +  PR++DTLLG  IA AAV  I PDW+
Sbjct: 483 FFATRSTRYTLATAAITLMVLFCFNQVGDGYGLIWPRLFDTLLGSLIAAAAVFLILPDWQ 542

Query: 537 FRQLPTVVSKTLNANCRYLDAILVQYHQGKDNGLSYRIARRDAHNSDAELASVISNMSAD 596
            R+L  VV+ TL+ N  YL  I+ QY  GK + L+YR+ARR+AHN+DA L++ +SNM  +
Sbjct: 543 GRRLNQVVANTLSCNSDYLRQIMRQYDSGKRDDLAYRLARRNAHNADAALSTTLSNMLLE 602

Query: 597 PKANKDVQDAAFRLLCLNHTLLSYISALGAHRERLNNPATLDLLNDAVCYVDGALHQ--- 653
           P   +   +  FR L L+HTLL+Y+S LGAHRE L + A   LL  A   +  +L     
Sbjct: 603 PGHFRKDAETGFRFLILSHTLLNYLSGLGAHRESLPDDARDALLESAAQQLAASLDDLAA 662

Query: 654 ---EEQDSGRITQALESLAERIQHAAPEPESKDQLVLQQIGLVIELLPELTMLNAQISK 709
              + +     ++  E+LA++++    E +   +LV  Q+GL+   L  L  +   + K
Sbjct: 663 ALAQNRPIAIYSEEEEALAQQLEQTPDEMDDAHRLVQTQLGLICRQLAPLRSMAVHLLK 721