Pairwise Alignments

Query, 336 a.a., quinone-dependent dihydroorotate dehydrogenase from Serratia liquefaciens MT49

Subject, 352 a.a., dihydroorotate dehydrogenase PyrD from Phaeobacter inhibens DSM 17395

 Score =  222 bits (565), Expect = 1e-62
 Identities = 137/327 (41%), Positives = 184/327 (56%), Gaps = 16/327 (4%)

Query: 9   ALFQLDPERAHELTFHQLRR-VTGTPLEFVIRQSVPTKPVSCMGLSFKNPLGLAAGLDKD 67
           AL + DPE AH L+   L+  +T TP       + P       GL   NP+GLAAG DK+
Sbjct: 11  ALHRCDPEAAHGLSIKALKMGLTPTPGPV----TSPRLATRIAGLDLPNPVGLAAGFDKN 66

Query: 68  GECIDAFGAMGFGFVEVGTVTPRPQSGNDKPRLFRIVEAEGLINRMGFNNQGVDNLVENV 127
            E +      GFGF+EVG  TPRPQ GN KPRLFR+ E +  INR GFNN+G+  + + +
Sbjct: 67  AEALRPLSQAGFGFIEVGAATPRPQPGNPKPRLFRLTEDQAAINRFGFNNEGMAVIGQRL 126

Query: 128 KKSHFGGILGINIGKNKDTPVEQGKDDYLICMDKVYPYAGYIAINISSPNTPGLRSLQYG 187
                  ++G+N+G NKD+       D+   +     +  +  +N+SSPNT  LR LQ  
Sbjct: 127 AVRPQDAVIGLNLGANKDSGDRAA--DFAKVLAHCGEHLDFATVNVSSPNTEKLRDLQGK 184

Query: 188 EALDDLLVAIKNKQQELHARHHKYVPVAVKIAPDLSEEELIQIADSLVRHNIDGVIATNT 247
            AL  LL  + + +  L  R    VPV +KIAPDL    +  IA+  V   ID VIATNT
Sbjct: 185 AALSALLNGVIDTRDGLDRR----VPVFLKIAPDLDRAGIEDIAEVAVETGIDAVIATNT 240

Query: 248 TLDRKLIQGLN--YCEQMGGLSGRPLQASSTEVIRRLSLELQGRLPIIGVGGIDSLMAAR 305
           TL R    GLN  + ++ GGLSG PL   ST V+ +LS  L GR+P++GVGGI +   A 
Sbjct: 241 TLKR---TGLNSSHRDEAGGLSGAPLFEKSTRVLAQLSELLNGRVPLVGVGGISNAEQAY 297

Query: 306 EKMAAGASLVQIYSGFIFKGPRLIKDI 332
            K+ AGAS VQ Y+  ++ G  L+ DI
Sbjct: 298 AKICAGASAVQFYTAMVYGGLSLVGDI 324