Pairwise Alignments

Query, 319 a.a., putrescine ABC transporter permease PotH from Serratia liquefaciens MT49

Subject, 286 a.a., spermidine/putrescine ABC transporter permease PotB from Vibrio cholerae E7946 ATCC 55056

 Score =  200 bits (508), Expect = 4e-56
 Identities = 109/276 (39%), Positives = 160/276 (57%), Gaps = 13/276 (4%)

Query: 34  VIAVPLLWLTLLFLLPFLIVFKISLAELALAVPPYTDLMSWADGKLDIALNFANYLQLTD 93
           ++ + + WL L  L+P L++   S      A              +  A  F NY +L D
Sbjct: 12  IVTLIVGWLVLFVLIPNLMIIGTSFLTRDEA------------NLIKFAFTFENYTRLLD 59

Query: 94  DPLYLDAYLQSLQVAAVSTVCCLIIGYPLAWAVAHSKASTRNILLLLVILPSWTSFLIRV 153
            PLY    L S  +A V+T+ CL+IGYP A+ VA      R  +L L+I+P WT+ LIR 
Sbjct: 60  -PLYGKVMLHSFYMAIVATLICLVIGYPFAYIVAKMPEKWRPFMLFLIIVPFWTNSLIRT 118

Query: 154 YAWMGILKNNGILNNFLLWLGVIDQPLVILHTNLAVYIGVVYSYLPFMVLPIYTALTRLD 213
           Y    +L   GILN  L+ LG+ID PL I+ T  AV IG+VY  LPFM+LP+Y+A+ +LD
Sbjct: 119 YGLKIVLGTQGILNQALMSLGLIDAPLRIMFTETAVMIGLVYILLPFMILPLYSAIEKLD 178

Query: 214 YSLVEASLDLGAKPLKTFFSVIVPLTRGGIIAGSMLVFIPAVGEFVIPELLGGPDSIMIG 273
            + +EA+ DLGA   +T   VI+PLT  GII G +LV +PA+G F I +LLGG  +++IG
Sbjct: 179 GTYIEAARDLGANKFQTLVRVILPLTMPGIIGGCLLVLLPALGMFYIADLLGGAKNLLIG 238

Query: 274 RVLWQEFFNNRDWPVASAVATVMLLLLILPIIWFHK 309
            V+  +  N RDWP  +A +  + L + + +  +++
Sbjct: 239 NVIKSQVLNARDWPFGAATSIALTLAMAIMLYAYYR 274