Pairwise Alignments

Query, 625 a.a., dipeptide ABC transporter ATP-binding protein from Serratia liquefaciens MT49

Subject, 533 a.a., ABC transporter related (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  486 bits (1252), Expect = e-142
 Identities = 271/551 (49%), Positives = 358/551 (64%), Gaps = 30/551 (5%)

Query: 21  VLSVRDLSVQFQQQGDTVEAVRNLSFDLDRGETLAIVGESGSGKSVTSLALMRLVEQGGG 80
           VL VR+L V F+Q G   EAV+ +SFD+ +GET+A+VGESGSGKSVT+L+ + L+     
Sbjct: 5   VLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAE 64

Query: 81  NIVSGTMPFRRRNGEVLDLAHARQGTLRTVRGADMAMIFQEPMTSLNPVFPVGEQIAESL 140
             VSG++ +        ++  A +  LR VRG D++ IFQEPMTSLNP+ P+ +QI ESL
Sbjct: 65  --VSGSITYAGT-----EMVGAPERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESL 117

Query: 141 RLHQAMDHRAARQAALQMLDLVRIPETKDVLNRYPHQLSGGMRQRVMIAMALSCKPALLI 200
            LHQ +   AAR   +++L+ V I + +  L  YPHQLSGG RQRVMIAMAL+  P LLI
Sbjct: 118 TLHQGLTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQRQRVMIAMALANGPDLLI 177

Query: 201 ADEPTTALDVTIQAQILQLIRVLQQEMQMGVIFITHDMGVVAEIADRVLVMRQGEQVEQG 260
           ADEPTTALDVTIQAQIL L+  L++   M ++FITHD+ +V  IADRV VM+ GE VE G
Sbjct: 178 ADEPTTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETG 237

Query: 261 PVRELFAAPQQPYTQALLAAVPRLGSMADLDFPAKFPLPNGADNGGPQDTVPPGATPILR 320
           P  E+FA PQ PYT+ LLAA P                       G  D VP  A  +  
Sbjct: 238 PTAEIFANPQHPYTRKLLAAEP----------------------SGQPDPVPEDAPVVAE 275

Query: 321 VENLVTRFDLRSGILNRVTRRVHAVENVSFDLYPGETLGLVGESGCGKSTTGRSLLKLVD 380
            ++L   F ++ GIL R    V AV N + ++  GETLG+VGESG GK+T   ++L+L+ 
Sbjct: 276 TDSLKVWFPIQRGILRRTVGHVKAVNNATLNVRAGETLGVVGESGSGKTTLALAILRLIS 335

Query: 381 SQRGTITFDGRQINQLKGPALQHLRRDIQFIFQDPYASLDPRLTVGFSIMEPLLVHNVAR 440
           S+ G I + G  I   K   L+ LR+D+Q +FQDPY SL PR+T+   I E L VH +  
Sbjct: 336 SE-GRIVYAGENIQGWKSRDLRRLRKDMQVVFQDPYGSLSPRMTIAQIIAEGLGVHGLEP 394

Query: 441 GKAAQERVAWLLERVGLKPEHARRYPHEFSGGQRQRICIARALALNPKVVIADESVSALD 500
           G   +  VA +L  VGL P    RYPHEFSGGQRQRI IARA+ L PK+V+ DE  SALD
Sbjct: 395 GADPRRMVAEILVEVGLDPAMMDRYPHEFSGGQRQRIAIARAMILRPKLVVLDEPTSALD 454

Query: 501 VSIQAQIVNLLLDLQREFGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENP 560
           +++Q QIV LL  LQR++G+A++FISHD+ VV  +SH+V VM  G +VE+G  R +FE P
Sbjct: 455 MTVQVQIVELLRALQRKYGLAYIFISHDLKVVRALSHKVIVMRQGDVVEMGEGRQIFERP 514

Query: 561 QHAYTRKLMAA 571
           +  YT++L+AA
Sbjct: 515 RSDYTKQLLAA 525



 Score =  209 bits (533), Expect = 2e-58
 Identities = 118/252 (46%), Positives = 162/252 (64%), Gaps = 6/252 (2%)

Query: 344 AVENVSFDLYPGETLGLVGESGCGKSTTGRSLLKLVDSQR---GTITFDGRQINQLKGPA 400
           AV+ VSFD+  GET+ LVGESG GKS T  S + L+       G+IT+ G ++       
Sbjct: 24  AVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAEVSGSITYAGTEMVGAPERD 83

Query: 401 LQHLR-RDIQFIFQDPYASLDPRLTVGFSIMEPLLVHNVARGKAAQERVAWLLERVGLKP 459
           L+ +R  D+ FIFQ+P  SL+P   +   I E L +H    G AA+ RV  LLE+VG++ 
Sbjct: 84  LRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTLHQGLTGDAARARVIELLEKVGIRD 143

Query: 460 EHAR--RYPHEFSGGQRQRICIARALALNPKVVIADESVSALDVSIQAQIVNLLLDLQRE 517
             +R   YPH+ SGGQRQR+ IA ALA  P ++IADE  +ALDV+IQAQI++LL DL+  
Sbjct: 144 AESRLGAYPHQLSGGQRQRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLADLKEA 203

Query: 518 FGIAFLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHAYTRKLMAAVPVADP 577
            G++ LFI+HD+ +V RI+ RV VM  G+IVE GP   +F NPQH YTRKL+AA P   P
Sbjct: 204 EGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPTAEIFANPQHPYTRKLLAAEPSGQP 263

Query: 578 NHAYKRQPLLVD 589
           +   +  P++ +
Sbjct: 264 DPVPEDAPVVAE 275