Pairwise Alignments

Query, 222 a.a., hypothetical protein from Serratia liquefaciens MT49

Subject, 247 a.a., fimbria/pilus periplasmic chaperone from Rahnella sp. WP5

 Score = 44.7 bits (104), Expect = 2e-09
 Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 11/188 (5%)

Query: 6   LAACLLLSLSQPVFALDVGEISSFMH-SDSARLSKEIKN-TTDSGRLVNIKIERISSPLE 63
           LAA  LL  +     + V  IS  M  S  A++S    + TT+  +    KI   ++P E
Sbjct: 13  LAASPLLLSASSFAGISVYPISVPMQKSGGAQISVTTNSATTEYVKTTVKKINNPATPQE 72

Query: 64  SGTVLPMGSKDEMLLSPASLILPANASDVVRFYYKGPSDNQERYYRIVWFD--QALSDVG 121
           + T +   S + ++++P    L    + ++R         +E Y   V+F+    L++ G
Sbjct: 73  NETTITQSSGNGIVVTPEKFGLAPGTTRIIRLINIQQPQTEEAYR--VYFEGVPGLNNNG 130

Query: 122 KNSAKRNAVATTSARIGTILVV----APRQDQFDYQFADGQIKNTGNATFKVVAYGNCRD 177
             S ++N      + I  +LV     APR D F       ++ NTGN   K+ + G C  
Sbjct: 131 GKSDQKNQTKLGISMIWGVLVTVPPAAPRLD-FTLNLESREVSNTGNIHLKINSIGLCPQ 189

Query: 178 KKEGNDCK 185
           +   + CK
Sbjct: 190 QLTDDGCK 197