Pairwise Alignments

Query, 222 a.a., hypothetical protein from Serratia liquefaciens MT49

Subject, 221 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.0 bits (123), Expect = 9e-12
 Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 25/201 (12%)

Query: 3   RLSLAACLLLSLSQPVFA---LDVGEISSFMHSDSARLSKEIKNTTDSGRLVNIKIERIS 59
           RL LA   ++  S  V+A   + +G +  +M S+     K+I N  DS   + I I  I 
Sbjct: 2   RLYLALFGIIFYSSQVYAAAEISIGTLFDYMPSNKTTYLKKIMNMGDSTAFIKISINEIK 61

Query: 60  SPLESGTVLPMGSKDE----MLLSPASLILPANASDVVRFYYKGPSDNQERYYRIVWFDQ 115
              E+G    +  ++     ++ SP+ LI+PA      R  +    D  ERY+R+ +   
Sbjct: 62  YD-ENGQPYEVPEQEAENRALIASPSRLIIPAKGVQATRLLFLDKKDT-ERYFRVRFIPV 119

Query: 116 ALSDVGKNSAKRNAVATTSAR------------IGTILVVAPRQDQFDYQFAD----GQI 159
              D      ++    T   R             G  L + P   ++  +  +     +I
Sbjct: 120 QQKDNDGFDEQKTEQKTEQIREELSAGIQILTGYGAFLFITPDNPKYSTEITEDTNSAEI 179

Query: 160 KNTGNATFKVVAYGNCRDKKE 180
           KN GN T  +  + +C  KK+
Sbjct: 180 KNNGNTTIILDFFESCNKKKQ 200