Pairwise Alignments

Query, 628 a.a., sigma-54-dependent Fis family transcriptional regulator from Serratia liquefaciens MT49

Subject, 647 a.a., ATPase AAA from Klebsiella michiganensis M5al

 Score =  868 bits (2244), Expect = 0.0
 Identities = 447/625 (71%), Positives = 511/625 (81%), Gaps = 1/625 (0%)

Query: 3   SSGPRLIDPASLAFQNVLDRLAPTDATVLIVGETGTGKELMARYLHHHSLRRDRPFLAVN 62
           SS P LIDPAS AFQ++LD+LAPT+ATVLIVGETGTGKE++ARYLHHHS RR RPFLAVN
Sbjct: 8   SSTPTLIDPASKAFQSLLDKLAPTEATVLIVGETGTGKEVVARYLHHHSPRRQRPFLAVN 67

Query: 63  CGALTESLAESELFGHEKGAFTGAVDRHQGWFEAAEGGTLLLDEIGELSLPLQVKLLRVL 122
           CGAL+ESLAE+ELFGHEKGAFTGAV  H GWFEAAEGGTLLLDEIGELSL LQVKLLRVL
Sbjct: 68  CGALSESLAEAELFGHEKGAFTGAVQSHPGWFEAAEGGTLLLDEIGELSLALQVKLLRVL 127

Query: 123 QEREVTRVGSHRPVKVNVRVVAATHVDLANAIRERRFREDLYYRLNVAAVTLPPLRQRRQ 182
           QERE+TRVGS + VKV+VRV+AATHVDL  AIRERRFREDLYYRLN+A V LPPLRQRRQ
Sbjct: 128 QEREITRVGSRKAVKVDVRVIAATHVDLMQAIRERRFREDLYYRLNIAIVPLPPLRQRRQ 187

Query: 183 DIPLLAEHFLTLYARRLGRPQLRLSAEALATLMDYPWPGNIRELENTLHNAVLLSKAPLI 242
           DIP+LA+HFL+LYARRLGRP  RL+ E LA LM+YPWPGNIRELENTLHNAVLLSK   I
Sbjct: 188 DIPVLADHFLSLYARRLGRPIRRLAPETLARLMEYPWPGNIRELENTLHNAVLLSKEEEI 247

Query: 243 TPQQLRLSAEMASLPPQGDASLDSFLRQQLVGNDGPLYQRVIDSLVRNAFELSQGNQLQA 302
            P QLRL+         GD  LD F+R+QL     PL++RV  +L+R A   S  NQ QA
Sbjct: 248 GPAQLRLTTLNNEPSAVGDNELDDFIRRQLSLPGEPLWERVTGALIRGAMAHSDDNQSQA 307

Query: 303 AALLGISRNTLRTHLGHLGLIKARRSVGGTALKSGRRTGSRERELRIGYQKFGNLGILKA 362
           AALLGISR+ LRT L +LG+IK+RR        + ++  SR+RELRIG+Q+FGNLGILKA
Sbjct: 308 AALLGISRHALRTQLANLGIIKSRRRQEPLYSAAVKKV-SRDRELRIGFQRFGNLGILKA 366

Query: 363 RQSLEARLVDSGVSVLWSEFPAGPQLLHALTNREIDFGTTGEVPPLFAQAGNSPLLYVAW 422
           RQSLE      GVSVLWSEFPAGPQLLHAL   EIDFGTTGE PP+FAQA NS L+YVAW
Sbjct: 367 RQSLEQAFASRGVSVLWSEFPAGPQLLHALACDEIDFGTTGEAPPVFAQATNSELVYVAW 426

Query: 423 EPAAPQSVALLVTDDSPIRTLADLRGKRIAVNKGSNVHYLLLQILDEAGLTLEDVRVVYA 482
           EP APQSVA++V   S IRTL+DLRGKRIA+NKGSNVH+LLL IL+EAGL L DV+VVY 
Sbjct: 427 EPPAPQSVAMVVPQHSDIRTLSDLRGKRIALNKGSNVHWLLLHILEEAGLALNDVKVVYI 486

Query: 483 PPKYPLTPSDHHAVDAWMMWDPLLSDAEQSGQFRVIANGVGRVSNHQFYLAHRDFAGHSS 542
           PPKYPLT SD+ AVDAWMMWDPLLSDAE SG+ RV+A+G GRV+NHQFYL+ RD+A  +S
Sbjct: 487 PPKYPLTASDYLAVDAWMMWDPLLSDAEYSGELRVVASGEGRVNNHQFYLSRRDYASRNS 546

Query: 543 DLLHGLMAALEQTGRYIDAHRDEAATLLSAELGQGIPSLTHALARRSHQTRRMDLNIIRQ 602
           D++  L+A L QTG++ID HR EA  LLSAELG    SL  ALARRSH+ R MDLN+IR 
Sbjct: 547 DIMQRLLAELTQTGQFIDQHRQEAVGLLSAELGLNAASLARALARRSHRPRPMDLNVIRA 606

Query: 603 QQAIADRFYALGLLPRAIKVREAIW 627
           QQ+IADRFYALGL+ + + VREA+W
Sbjct: 607 QQSIADRFYALGLIHKPVSVREAVW 631