Pairwise Alignments

Query, 628 a.a., sigma-54-dependent Fis family transcriptional regulator from Serratia liquefaciens MT49

Subject, 392 a.a., sigma-54 dependent transcriptional regulator from Ralstonia sp. UNC404CL21Col

 Score =  281 bits (720), Expect = 3e-80
 Identities = 156/349 (44%), Positives = 211/349 (60%), Gaps = 30/349 (8%)

Query: 10  DPASLAFQNVLDRLAPTDATVLIVGETGTGKELMARYLHHHSLRRDRPFLAVNCGALTES 69
           DP S A  + ++++AP+DA VLI GETGTGKEL+ARYLH+ S R+  PF+ V+CGA +++
Sbjct: 26  DPRSRALLDEVEQVAPSDAAVLISGETGTGKELIARYLHNRSARQGGPFVVVSCGAFSDT 85

Query: 70  LAESELFGHEKGAFTGAVDRHQGWFEAAEGGTLLLDEIGELSLPLQVKLLRVLQEREVTR 129
           L ++ELFGHE GAF GA     GWFE A GGT+ LDE+ +L LP+Q KLLRVLQERE+ R
Sbjct: 86  LVDAELFGHENGAFAGAFGTQVGWFEQANGGTIFLDEVNDLPLPVQNKLLRVLQEREIVR 145

Query: 130 VGSHRPVKVNVRVVAATHVDLANAIRERRFREDLYYRLNVAAVTLPPLRQRRQDIPLLAE 189
           +G   P+ V++R+VAAT VDL   ++E+RFR+DLYYRLNV  + +  L++R  DI  LA 
Sbjct: 146 LGGRTPIPVDLRIVAATTVDLETLVQEKRFRKDLYYRLNVVNLNVLTLKERPGDIVPLAR 205

Query: 190 HFLTLYARRLGRPQLRLSAEALATLMDYPWPGNIRELENTLHNAVLLSKAPLITPQQLRL 249
           +F+  Y++RLG  +  L+ EA   L   PW GN+RELEN +H  +LL     I    LRL
Sbjct: 206 YFINTYSKRLGHARATLTPEAERLLTQSPWHGNVRELENVIHRTLLLCDGNTIDASDLRL 265

Query: 250 SAEMASLPPQG-----------------------------DASLDSFLRQQLVGND-GPL 279
           S+  AS P Q                              +A+L     Q L  +  G +
Sbjct: 266 SSRPASSPAQAVAQARPETEPPIASTAPPTAQPPDPSSTDEAALLCQAIQHLCNDSVGNV 325

Query: 280 YQRVIDSLVRNAFELSQGNQLQAAALLGISRNTLRTHLGHLGLIKARRS 328
           YQ V D+L R  F     +Q  AA +LG+SRN +R  L  LG + A R+
Sbjct: 326 YQVVEDALFREVFRYCHYSQSDAARVLGVSRNVVRARLIRLGEVGAPRT 374