Pairwise Alignments

Query, 628 a.a., sigma-54-dependent Fis family transcriptional regulator from Serratia liquefaciens MT49

Subject, 330 a.a., sulfonate ABC transporter substrate-binding protein from Ralstonia sp. UNC404CL21Col

 Score =  252 bits (643), Expect = 2e-71
 Identities = 125/284 (44%), Positives = 187/284 (65%)

Query: 345 RELRIGYQKFGNLGILKARQSLEARLVDSGVSVLWSEFPAGPQLLHALTNREIDFGTTGE 404
           ++LRIGYQK+G L +LKAR +LE RL   G+ V W+EFPAGPQLL  L    IDFGTTGE
Sbjct: 39  KQLRIGYQKYGTLTVLKARGTLEKRLAAQGIEVKWTEFPAGPQLLEGLNVGAIDFGTTGE 98

Query: 405 VPPLFAQAGNSPLLYVAWEPAAPQSVALLVTDDSPIRTLADLRGKRIAVNKGSNVHYLLL 464
            PP+FA A  + L+YV  +P AP   A++V   SP++++ADL+GKR+A NKGSNVHYLL+
Sbjct: 99  APPIFALAAGANLVYVGNQPPAPTGEAIIVPKTSPLKSVADLKGKRVAFNKGSNVHYLLV 158

Query: 465 QILDEAGLTLEDVRVVYAPPKYPLTPSDHHAVDAWMMWDPLLSDAEQSGQFRVIANGVGR 524
           ++L++A +   D++ VY  P       +  AVDAW++WDP  + AEQ    RV+A+G G 
Sbjct: 159 KLLEKANVPYSDIQPVYLTPADARAAFERGAVDAWVIWDPFFAAAEQQLGARVLADGTGV 218

Query: 525 VSNHQFYLAHRDFAGHSSDLLHGLMAALEQTGRYIDAHRDEAATLLSAELGQGIPSLTHA 584
           V+N Q++LA + +AG   D+L+ ++  L++T  +  A+  +  T+L  +LG     +  +
Sbjct: 219 VNNSQYFLASKGYAGARPDVLNIVLDELKKTDTWAAANPKDVTTILGPQLGLEPAVVARS 278

Query: 585 LARRSHQTRRMDLNIIRQQQAIADRFYALGLLPRAIKVREAIWQ 628
           ++R ++  + +    +  QQ IAD F+AL L+PR +KV +A WQ
Sbjct: 279 VSRIAYGIQPVGAEALADQQRIADTFHALKLIPRPVKVADAAWQ 322