Pairwise Alignments

Query, 628 a.a., sigma-54-dependent Fis family transcriptional regulator from Serratia liquefaciens MT49

Subject, 469 a.a., nitrogen metabolism transcriptional regulator, NtrC, Fis family (RefSeq) from Shewanella sp. ANA-3

 Score =  255 bits (651), Expect = 3e-72
 Identities = 149/327 (45%), Positives = 199/327 (60%), Gaps = 18/327 (5%)

Query: 11  PASLAFQNVLDRLAPTDATVLIVGETGTGKELMARYLHHHSLRRDRPFLAVNCGALTESL 70
           PA       + RL+ +  +VLI G++GTGKEL+A  LH HS R+D+PF+A+N  A+ + L
Sbjct: 145 PAMQEVFRAIGRLSRSSISVLINGQSGTGKELVAGALHKHSPRKDKPFIALNMAAIPKDL 204

Query: 71  AESELFGHEKGAFTGAVDRHQGWFEAAEGGTLLLDEIGELSLPLQVKLLRVLQEREVTRV 130
            ESELFGHEKGAFTGA +  QG FE A GGTL LDEIG++ L +Q +LLRVL + +  RV
Sbjct: 205 IESELFGHEKGAFTGAANVRQGRFEQANGGTLFLDEIGDMPLDVQTRLLRVLADGQFYRV 264

Query: 131 GSHRPVKVNVRVVAATHVDLANAIRERRFREDLYYRLNVAAVTLPPLRQRRQDIPLLAEH 190
           G H  V+V+VR++AATH DL   + +  FREDL++RLNV  V LPPL QRR+DIP LA H
Sbjct: 265 GGHSAVQVDVRIIAATHQDLEQLVLKGGFREDLFHRLNVIRVHLPPLSQRREDIPQLATH 324

Query: 191 FLTLYARRLGRPQLRLSAEALATLMDYPWPGNIRELENTLHNAVLLSKAPLITPQQL--R 248
           FL   A+ +G     L+ E  A L   PWPGN+R+LENT     +++    I PQ L   
Sbjct: 325 FLASAAKEIGVEAKILTKETAAKLSQLPWPGNVRQLENTCRWLTVMASGQEILPQDLPQE 384

Query: 249 LSAEMASLPPQGDASLD------SFLRQQL-VGNDG------PLYQRVIDSLVRNAFELS 295
           L  E AS+ P    S D       ++ Q+L  GN        P ++R+   L+  A   +
Sbjct: 385 LLKEPASINPMAKGSQDWQSALTEWIDQKLSEGNSDLLTEVQPAFERI---LLETALRHT 441

Query: 296 QGNQLQAAALLGISRNTLRTHLGHLGL 322
           QG++ +AA  LG  RNTL   L  L +
Sbjct: 442 QGHKQEAAKRLGWGRNTLTRKLKELSM 468