Pairwise Alignments

Query, 554 a.a., glutamine--tRNA ligase from Serratia liquefaciens MT49

Subject, 583 a.a., glutaminyl-tRNA synthetase from Herbaspirillum seropedicae SmR1

 Score =  592 bits (1525), Expect = e-173
 Identities = 300/573 (52%), Positives = 391/573 (68%), Gaps = 28/573 (4%)

Query: 6   ARPTNFIRQIVDEDLASGKHTS-----------VHTRFPPEPNGYLHIGHAKSICLNFGI 54
           A  TNF+R I++ DL SG +             V TRFPPEPNGYLHIGHAKSICLNFG+
Sbjct: 12  APSTNFLRGIIESDLVSGVYAQRSNREGEALPQVVTRFPPEPNGYLHIGHAKSICLNFGL 71

Query: 55  AKDYQGQCNLRFDDTNPVKEDIEFVESIKHDVEWLGFEWS----GNVRYSSDYFDQLHQY 110
           A DY G+C++RFDDTNP KE+ E+V++I   V+WLGF W      ++ Y+S+YFD ++  
Sbjct: 72  AADYAGRCHMRFDDTNPEKEEQEYVDTILDSVKWLGFSWEHEGKSHLYYASNYFDVMYAC 131

Query: 111 AVELINKGLAYVDELSPEQIREYRGSLTSPGKDSPYRGRSVEENLALFEKMRNGEFAEGS 170
           A  LI KGLAYVDE + EQ+RE RG+LT PGK+SP+R R  EE+L LFE+MR+G+  +GS
Sbjct: 132 AQALIRKGLAYVDEQNAEQMRENRGTLTEPGKNSPWRDRPAEESLRLFEEMRDGKHPDGS 191

Query: 171 ACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLC 230
             LRAKIDMASP + +RDP +YRI+ A HH TG+KW +YPMY F H I DALE I+HS+C
Sbjct: 192 MILRAKIDMASPNMNLRDPAIYRIRHATHHNTGDKWRVYPMYTFAHPIEDALENISHSIC 251

Query: 231 TLEFQDNRRLYDWVLDNITIPCH-----PRQYEFSRLNLEYAIMSKRKLNQLVTEKIVEG 285
           TLEF+D R  YDW+L+ +          P QYEF+RLNL Y I SKRKL QLV EKIV G
Sbjct: 252 TLEFEDQRPFYDWLLEQLAEEGFFKKPLPHQYEFARLNLTYIITSKRKLRQLVDEKIVSG 311

Query: 286 WDDPRMPTVSGLRRRGYTAASIREFCQRIGVTKQDNNVEMVALEACIREELNDNAPRAMA 345
           WDDPRMPT+ GLRRRGYT  +IR  C R G +K ++ ++   LE  +RE+L+  APRA+A
Sbjct: 312 WDDPRMPTIVGLRRRGYTPEAIRLMCDRTGASKNNSWIDFSVLEGALREDLDPKAPRAVA 371

Query: 346 VLDPVKIVIENMTSGVEM-----VTMPNHPNKPEMGSREVPFSREVYIDRADFREEANKQ 400
           VL P+K++I+N   GV +     V  P HP + +   R  P ++E++I+R DF EE  K 
Sbjct: 372 VLRPLKLIIDNFPEGVSIDCSAPVYPPAHP-EHDTAHRHFPITKELWIEREDFMEEPTKG 430

Query: 401 YKRLVLGKEVRLRNAYVIKAERVEKDAEGEITTIFCSYDPDTLS-KDPADGRKVKGVIHW 459
           Y RL  G +VRLR  YV++    +KD  G +  + C+Y  D+ S  + +   KVKG +HW
Sbjct: 431 YFRLFPGNKVRLRYGYVVECTGCDKDEHGNVIAVHCNYFEDSKSGTEGSSNYKVKGNLHW 490

Query: 460 VSAEHALPAEIRVYDRLFNVPNP-AAAEDFLATINPESLVIKHGFVEPSLATAQPEKAYQ 518
           VSAEHAL  E+R+YDRLF+ P+P A  +DFLA +NP S  +   ++EP+L TAQP + YQ
Sbjct: 491 VSAEHALATEVRLYDRLFSDPHPDAGGKDFLAALNPNSKEVITAYLEPTLKTAQPGEIYQ 550

Query: 519 FEREGYFCADNRYSSAEHLVFNRTVGLRDTWAK 551
           FER GYF AD   S+A   +FNR V L+D+W K
Sbjct: 551 FERHGYFVADRVDSTAGQPIFNRAVTLKDSWGK 583