Pairwise Alignments

Query, 648 a.a., PTS N-acetyl glucosamine transporter subunit IIABC from Serratia liquefaciens MT49

Subject, 485 a.a., PTS system, glucose-specific IIBC component (RefSeq) from Shewanella amazonensis SB2B

 Score =  290 bits (741), Expect = 1e-82
 Identities = 171/473 (36%), Positives = 266/473 (56%), Gaps = 41/473 (8%)

Query: 6   FFQRLGRSLQLPIAVLPVAALLLRFGQ------PDLLNISFIAQAGGSIFDNLALIFAIG 59
           F QRL ++L +PIA+LP A +++          PD+ N+  ++  G  IFD + ++FAI 
Sbjct: 22  FAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANVLMLS-VGKLIFDIMPMLFAIA 80

Query: 60  VAATWSKDNAGSAALAGAVGYFILTKAMVTI-------------NPAINMGVLAGIITGL 106
           VA  + +D  G AA + A GY +L   +                 P I+ G+  G++ G 
Sbjct: 81  VAIGFCRDQ-GIAAFSAAFGYGVLLSTLAAAAKVYHLPSHIVWGTPTIDTGIAGGMLVGG 139

Query: 107 VGGAVYNRWSGIKLPEFLSFFGGKRFVPIATGFFCLILAAIFGYIWPPVQNAIHAGGEWI 166
           +          ++LP   SFF G+R  P+      ++LA +  +IWPP+  +I    +W 
Sbjct: 140 ITCVAVRLSEKLRLPAVFSFFEGRRSAPLIMIPLVMLLAVMLAFIWPPLALSIERLSDWA 199

Query: 167 VSMG-AVGSGIFGFVNRLLIPTGLHQVLNTIAWFQIGEFTNAAGTIFHGDINRFYAGDGT 225
           V    A+  G +G V RLL+P GLH + N   + ++G++ +  G I  G++ R++AGD +
Sbjct: 200 VYQEPAIAFGFYGMVERLLLPLGLHHIWNAPFYLEVGQYAHD-GEIVRGEMARYFAGDPS 258

Query: 226 AGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVALTAFLTGVTEPLEFLFM 285
           AG    G+  I M+GLP AALA++  A + +R  V G++LS A  ++LTGVTEP+EF F+
Sbjct: 259 AGNLAGGYL-IKMWGLPAAALAIWRCADRNQRNRVAGVMLSAATASWLTGVTEPIEFAFL 317

Query: 286 FLAPLLYLVHAILTGISLFVATLLGIHAGFSFSAGAIDYVLMYNLPAASKNVWMLVVMGL 345
           F+APLLYL HA+LTG++  +A LL +H    FS G +D+VL++  P +S   W +  +G 
Sbjct: 318 FVAPLLYLCHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLF--PQSSNTHW-IWFLGP 374

Query: 346 VAFAVYFVLFSIIIRAFNLKTPGREDASDDIVAPEANSNTDEGLRALSRSYIGAIGGSDN 405
           + F +Y++LF   I AFNLKTPGR +A             D G +    + + A+GG  N
Sbjct: 375 LTFVIYYILFRASILAFNLKTPGRFEA-------------DTGQKRNLIAIVSALGGGGN 421

Query: 406 LTGIDACITRLRLSVKDSSKVLDASCKRLGASGVVKLNKQTVQVIVGSKAEAI 458
           +  + AC+TRLR+SV D S+V       LGA GV+ +    VQ++ G+KAE +
Sbjct: 422 IADLSACLTRLRISVADPSQVDRQRLMSLGAKGVIVVG-SGVQLVFGTKAETL 473