Pairwise Alignments

Query, 648 a.a., PTS N-acetyl glucosamine transporter subunit IIABC from Serratia liquefaciens MT49

Subject, 560 a.a., N-acetylglucosamine phosphotransferase system, IIB/IIC components (EC 2.7.1.193) (from data) from Sphingomonas koreensis DSMZ 15582

 Score =  441 bits (1135), Expect = e-128
 Identities = 251/570 (44%), Positives = 341/570 (59%), Gaps = 51/570 (8%)

Query: 3   ILGFFQRLGRSLQLPIAVLPVAALLLRFGQPDLLNISFIAQAGGSIFDNLALIFAIGVAA 62
           IL   Q LGR+L LPIAVLPVA LLLR GQPDLL+I+F++ AG +IF NL ++FAIGVA 
Sbjct: 4   ILETLQPLGRALMLPIAVLPVAGLLLRIGQPDLLDIAFVSAAGTAIFGNLGILFAIGVAV 63

Query: 63  TWSKDNAGSAALAGAVGYFILTKAMVTI---NPAINMG---------------------- 97
            +++D  G+AALAG   Y + T    T     P +  G                      
Sbjct: 64  GFARDGNGAAALAGVTCYLVSTTGAQTFLIAPPEVVAGLPDAAAKVVAQAWATGQIDRLE 123

Query: 98  VLAGIITGLVGGAVYNRWSGIKLPEFLSFFGGKRFVPIATGFFCLILAAIFGYIWPPVQN 157
           V  GII+GL+GG  YNR++ I LPE+L+FFGG+RFVPIA G   L+LA + GY +  + +
Sbjct: 124 VPIGIISGLIGGKFYNRFATIALPEYLAFFGGRRFVPIAAGIAGLLLAGVLGYGYAHISS 183

Query: 158 AIHAGGEWIVSMGAVGSGIFGFVNRLLIPTGLHQVLNTIAWFQIGEFTNAAGTIFHGDIN 217
           A+ A    +V  G  G  ++G +NRLL+ TGLH +LN +AWF +G+F  A G     D+ 
Sbjct: 184 ALDAASHAVVESGGAGMFVYGVLNRLLLVTGLHHLLNNVAWFLVGDFGGATG-----DLG 238

Query: 218 RFYAGDGTAGMFMSGFFPIMMFGLPGAALAMYFAAPKERRPMVGGMLLSVALTAFLTGVT 277
           RF+AGD  AG FMSGFFP+MMFGLP A LAMY  A  ERR  VGGML S+A T+FLTGVT
Sbjct: 239 RFFAGDPNAGAFMSGFFPVMMFGLPAACLAMYHEARPERRKAVGGMLFSLAFTSFLTGVT 298

Query: 278 EPLEFLFMFLAPLLYLVHAILTGISLFVATLLGIHAGFSFSAGAIDYVLMYNLPAASKNV 337
           EP+EF FMFLAP+LY +HA+LTG+++ +  +LGI  GF FSAG  DYVL + L   S   
Sbjct: 299 EPIEFTFMFLAPVLYAIHAVLTGVAMTLMDMLGIKLGFGFSAGLFDYVLNFKL---STRP 355

Query: 338 WMLVVMGLVAFAVYFVLFSIIIRAFNLKTPGREDASDDIVAPEANSNTDEGLRALSRSYI 397
           WML+ +G     +Y+ LF   IR  +L TPGRE       A E  +  + G      +++
Sbjct: 356 WMLLPVGAAYAVIYYTLFRFFIRKLDLATPGREKGEAVAAAGETAAGNERG-----AAFV 410

Query: 398 GAIGGSDNLTGIDACITRLRLSVKDSSKVLDASCKRLGASGVVKLNKQTVQVIVGSKAEA 457
            A+GG+ NLT +DAC TRLRL V D S V DA+   LGA G+++ +    QV++G  A+ 
Sbjct: 411 KALGGAANLTSVDACTTRLRLIVADQSAVDDAALNALGARGIIRPSANATQVVLGPIADL 470

Query: 458 IADGMRAVIAAGPVPAAEVAPAAGVTAVKAQAVPNAVKVAFESLVAPVTGEV-VALDQVP 516
           +A+ +R  I  G         AA V+A  AQA+ +       +++A + GE  +   Q  
Sbjct: 471 VAEEIRGAIGGG---------AAAVSAAPAQALADEAVTLPAAILAALGGEANIRALQAL 521

Query: 517 DEAFASKAVGDGLAIRPTDKTVVAPADGTI 546
              F  + V    A R  + +++A A+G +
Sbjct: 522 HGRFRVEVVD---AARTDEASLLAAANGAV 548