Pairwise Alignments

Query, 156 a.a., 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH from Serratia liquefaciens MT49

Subject, 157 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 84.0 bits (206), Expect = 1e-21
 Identities = 49/157 (31%), Positives = 79/157 (50%), Gaps = 1/157 (0%)

Query: 1   MKLQLVAVGTKMPDWVQTGFMDYLHRFPKDMPFELTEIPAGKRGKNADIKRILEKEGEQM 60
           MK  L+ VG  +     T   DY+ R  + + F++  IP  K  K+  + +  EKEGE +
Sbjct: 1   MKTTLLVVGRTVEQHYITAINDYIQRTKRFITFDMEVIPELKNTKSLSMDQQKEKEGELI 60

Query: 61  LAAVGKGNRIVTLDIPGTPWETPQLAQQLERWKQD-GRNVSLLIGGPEGLAPACKAAAEQ 119
           L A+  G+ IV LD  G    + + A  ++R      + +  +IGGP G +      A +
Sbjct: 61  LKALQPGDVIVLLDEHGKEMRSLEFADYMKRKMNTVNKRLVFVIGGPYGFSEKVYQVANE 120

Query: 120 SWSLSPLTLPHPLVRVLVAESLYRAWSITTNHPYHRE 156
             S+S +T  H ++R++  E +YRA +I    PYH E
Sbjct: 121 KISMSKMTFSHQMIRLIFVEQIYRAMTILNGGPYHHE 157