Pairwise Alignments

Query, 486 a.a., diguanylate cyclase from Serratia liquefaciens MT49

Subject, 591 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain from Sphingomonas koreensis DSMZ 15582

 Score =  118 bits (296), Expect = 5e-31
 Identities = 68/164 (41%), Positives = 96/164 (58%), Gaps = 5/164 (3%)

Query: 305 LEHSANHDFLTGVLARNALTRKAGEMLEHKYKSKEAVSLLLIDIDHFKQINDTHGHLAGD 364
           LE  A  D +TGVL R A  R+  E    ++      +L ++D+DHFK +ND  GH AGD
Sbjct: 427 LERQAATDPMTGVLNRRAFERRLSENASREFG--HVGTLAVLDLDHFKGVNDRLGHAAGD 484

Query: 365 QVLASFAHIVRRELRHDQLFGRLGGEEFAIMLPRALAAQGVALAEHLRQLVQKTELYPGG 424
             L SFA ++R  LR +    RLGGEEFAI+ P   A   +A  E LR+ +++T++    
Sbjct: 485 AALLSFADLMRANLRSEDAIARLGGEEFAILFPTLSAPAALATCERLRRALERTDI-AAA 543

Query: 425 KVPLKITISVGVANLAMNEVKSLEQLMNMADIALYRAKSQGRNR 468
           +   ++T+S+G+A   M      ++LM  AD ALYRAKS GRNR
Sbjct: 544 EGNFRVTVSIGLA--PMQPGIHADELMRRADAALYRAKSAGRNR 585



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 33/152 (21%), Positives = 61/152 (40%), Gaps = 2/152 (1%)

Query: 29  YLLSLLGI-FTRPIGSLSLFWPVNAILLGLLLRKPAYASPAGWLITYLGMIAADLTNGES 87
           ++L+L  I FTR   +++L W  NA LL  L  +P        L+T L    A +     
Sbjct: 22  FMLALAAISFTRLSDNVALLWLANAPLLAALCTRPVREHRQLLLVTALASGLATMVISPF 81

Query: 88  LSLALWLNACNMSLIATGYGVMLLLPQSQRRMGKPQAI-LYMFTASLSGAAVASTLSILR 146
             LA      N+  +  G+ ++  L Q++    + ++I  +  +A     A + +++ + 
Sbjct: 82  SPLAPIFILANIGEVVLGWYLLRYLGQARGVFLRLRSIPAFALSAGFIAPAASGSIAGIT 141

Query: 147 NDSLYNNTAIIAWLAWFSEQFSTNLLLLPVLL 178
               +       W  W        L+  PV L
Sbjct: 142 LWLAHGTEPAFTWANWMIGHGLGILIATPVAL 173