Pairwise Alignments

Query, 486 a.a., diguanylate cyclase from Serratia liquefaciens MT49

Subject, 494 a.a., diguanylate cyclase (GGDEF) domain from Sphingomonas koreensis DSMZ 15582

 Score =  270 bits (690), Expect = 8e-77
 Identities = 162/467 (34%), Positives = 251/467 (53%), Gaps = 28/467 (5%)

Query: 22  ITLFLLAYLLSLLGIFTRPIGSLSLFWPVNAILLGLLLRKPAYASPAGWLITYLGMIAAD 81
           + +F   +  ++  I TR   +L+  WP NA++LGLL+R P  A+ +GWL    G + AD
Sbjct: 29  LVVFFAVFASAMFSILTRSPAALATIWPANAVMLGLLIRFPRLANASGWLGGVAGYLLAD 88

Query: 82  LTNGESLSLALWLNACNMSLIATGYGVMLLLPQSQRRMGKPQAILYMFTASLSGAAVAST 141
           L  GE     + L A N++ I  GY ++  + +   ++  P+++ ++  A +  A  A  
Sbjct: 89  LITGEDPVRLVLLFAGNLAGIIAGYLLLSRVERRNLKLRDPRSLHHVTAAIMFAAFAAGL 148

Query: 142 LSILRNDSLYNNTAIIAWLAWFSEQFSTNLLLLPVLLA--APRLKQL---------LRLQ 190
           +  + N  ++  ++   +L WF+ +    +  LPVLL   APR ++L          R  
Sbjct: 149 VGTIANPLIFEGSSWQGFLFWFATEAVNYVAFLPVLLTLPAPRRRRLRYPLAERRYARPP 208

Query: 191 IN-WQLRASMPLLALLFSLVFSVYIGGPGAIAFPIPALLWCAVRYQLFTVTLLTLLTGMT 249
           +N   LR  +P L+L+  L+ +  IGGPGA+ F +P L WC +RY +  V LL LLT   
Sbjct: 209 LNAGMLRKLLPGLSLVVGLLLATVIGGPGALVFTLPGLFWCGLRYSIPVVALLGLLTSCA 268

Query: 250 EISSISANLMLYETPNNHNAYLDTL------MSARLGIAMLVMGPLILSSSIAVNRKLLR 303
                    +L E  ++H   L+ +      +S RLG+A++ + PL +++ IA   +++ 
Sbjct: 269 ---------VLIEVNHDHIRLLEGIGSQAFALSVRLGVALITLTPLYVATVIAERNEIVH 319

Query: 304 RLEHSANHDFLTGVLARNALTRKAGEMLEHKYKSKEAVSLLLIDIDHFKQINDTHGHLAG 363
            LE  A+ D LTG L R A   +   ++    + +  V++L++DIDHFKQ+ND HGH  G
Sbjct: 320 NLERLASTDPLTGALNRRAFFHRGERLMRLLARQERQVAVLMLDIDHFKQVNDRHGHAGG 379

Query: 364 DQVLASFAHIVRRELRHDQLFGRLGGEEFAIMLPRALAAQGVALAEHLRQLVQKTELYPG 423
           D++L +F H +R +LR   L GR GGEEFAI+LP      G  +AE LR  V +  L+  
Sbjct: 380 DRILQAFTHTIRAQLRDGALLGRFGGEEFAILLPIVAEGDGAIVAERLRAGVGQLRLFDQ 439

Query: 424 GKVPLKITISVGVANLAMNEVKSLEQLMNMADIALYRAKSQGRNRVE 470
               LK TIS+GV   A  +   L  L N+AD  LY AK  GRNRVE
Sbjct: 440 SGQVLKATISIGVVE-AQADATPLTDLTNIADRRLYLAKRNGRNRVE 485