Pairwise Alignments

Query, 265 a.a., helix-turn-helix transcriptional regulator from Serratia liquefaciens MT49

Subject, 276 a.a., AraC family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  120 bits (300), Expect = 4e-32
 Identities = 83/263 (31%), Positives = 126/263 (47%), Gaps = 15/263 (5%)

Query: 3   RFDALDGLELLVADFSDHRFDVHWHETWSIGVVLRGANNNSAKGDADGIVSRGQISLIAP 62
           R   L G +LL A++ DH F  HWH+ ++I V++ GA      G +D +   G + +I P
Sbjct: 15  RTPLLPGADLLTAEYHDHEFTPHWHDAYTIPVIVAGAEGYRYLG-SDYVAEAGSVPIINP 73

Query: 63  GQMHAGTVLGAAGCHYFMFYPSHEMLLDAAENME-----MP--LPPAVKGKHIG-HAPFA 114
           G++H G+    AG  Y + Y   + +   A  +      +P   P  ++   +      A
Sbjct: 74  GELHTGSKAVEAGWRYRVMYAPVDFIHALANEVSGKPQALPWFAPGVIRDPDLAARLAHA 133

Query: 115 NRLCEAATVLTAAQSSRFDREVAWSHCVADLLAVCSPRRAPLTDAGIAPGLRRAKEYLHD 174
           +RL EA     AA+++  D     +  V       +P R    DA +       ++ L  
Sbjct: 134 HRLLEAGGDALAAEAAMLD--ALSTLLVRYAQTQPAPSRLATDDARVTI----MQDRLTG 187

Query: 175 NPAREVRLERLAQAAGLSRFHLCRQFSATFGLSPSRYQRQLRLQQAKALLSRGGDIAEIA 234
           +    V L  +AQ AGLS FH  R F+ T GL P  ++ Q+RLQ+A A L  G  + E+A
Sbjct: 188 DLVEPVTLAEVAQVAGLSPFHAARLFTQTTGLPPHAWRNQVRLQRALAPLRAGVSVTEVA 247

Query: 235 IACGFADQSHLGRTFKSSYGVTP 257
            A GF DQSH  R F+  +GV P
Sbjct: 248 AASGFTDQSHFTRHFRRMFGVPP 270