Pairwise Alignments

Query, 402 a.a., tyrosine-type recombinase/integrase from Serratia liquefaciens MT49

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score =  330 bits (847), Expect = 4e-95
 Identities = 169/394 (42%), Positives = 246/394 (62%), Gaps = 7/394 (1%)

Query: 3   LTDVKVRSAKPTDKPYKLTDGEGMHLMVHPNGSKYWRLQYRFDG-KQKMLALGIYPEISL 61
           LTD KVR+AKP +KPYKL DG+G++L V P+G+K+WR +Y     K  +  +G YP +SL
Sbjct: 5   LTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWITPEKDGIYTIGEYPVVSL 64

Query: 62  SEARQRRDEAKRQVANAIDPSEQKKVEKLARKATVENTFKAIALEWHEYKRPNWSKGYAE 121
           S+AR+ R+ A+ Q    I+P+  K+ E+L R     NTF+A+A EW +  R +W++ Y  
Sbjct: 65  SDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYLY 124

Query: 122 DIMEAFENDIFPDIGKRPIAEIKPLEILSSLRKLEKRGVLDKLRKIRQACNQVFRYAIVT 181
            +     ND+FP IG  PI  +    +L  +R +E+RG       IRQ   Q+FRYA+ T
Sbjct: 125 QVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVAT 184

Query: 182 GRAETNPASELASALTPPKSVHYPHLLADELPDFLQALATYSGSPITRLATRILMLTGVR 241
            RA+++P++ L  A+      H P L  DE+P  L  L  Y G   T LAT++++ T VR
Sbjct: 185 LRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFVR 244

Query: 242 TVELRQAEWKEFDFDKCVWEVPVERMKMRR------PHLVPLSDQVVASLREIQAVTGRY 295
           TVELR+AEW EFD +   W VP +RMKM++       H+VPLS Q +  L+E++ ++G  
Sbjct: 245 TVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGGR 304

Query: 296 KLVFPGRNDITKPMSEASINQVLKRIGYHGKATGHGFRHTMSTILHERGYDTAWIELQLA 355
           K +FP        M+  +IN+ L+R+GY GK +GHGFR T ST+LHE G++   IE QLA
Sbjct: 305 KFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQLA 364

Query: 356 HVDKNTIRGTYNHAQYLELRRDMLQWYGDYFDEL 389
           H ++N ++  YNHA+YL  RR+M+Q + D+ DEL
Sbjct: 365 HAERNKVKAAYNHAEYLPERREMMQAWSDWIDEL 398