Pairwise Alignments

Query, 229 a.a., multidrug efflux transporter transcriptional repressor AcrR from Serratia liquefaciens MT49

Subject, 254 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  110 bits (275), Expect = 3e-29
 Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 11/200 (5%)

Query: 3   RKTKQQAQETRQHILDAAVREFSERGVSATSLTDIATAAGVTRGAIYWHFKNKVDLFNEV 62
           R+TK++A++TR  IL +A R F ++GV+ TSL  IA  AGVTRGA+YWHF+NK  LF+E+
Sbjct: 41  RRTKEEAEKTRIAILASAERLFLDKGVAHTSLDQIARDAGVTRGAVYWHFQNKAHLFHEM 100

Query: 63  W---ELSESKIGDLELEYQAKYPENPLRILREILIYILTATVDDARRRALMEIVFHKCEF 119
                L   ++ +       + P   L  LR + +  ++    + ++R +  I+ HKCEF
Sbjct: 101 LNQIRLPPEQMTERLCSCDQQQPLQALIALRNLTVEAISTLASNEQKRRIFTILLHKCEF 160

Query: 120 VGEMLPLQDARKVLYLEGYDRIESVLRNS---MRHGQLPADLHTRRASIILRAYITGLME 176
             E+   ++       +  D  E++LRN+   +R G  P     R A++ L A + GL  
Sbjct: 161 TDELREAEERHHAFINQFIDLCENLLRNASTCLRPGVTP-----RLAALSLHALVVGLFT 215

Query: 177 NWLFMPESFDLKAEAAVLID 196
           +W    E F  + +   LID
Sbjct: 216 DWTRDTELFAPEVDTRALID 235