Pairwise Alignments

Query, 395 a.a., multidrug efflux RND transporter periplasmic adaptor subunit SdeX from Serratia liquefaciens MT49

Subject, 410 a.a., hemolysin D from Cupriavidus basilensis FW507-4G11

 Score =  357 bits (916), Expect = e-103
 Identities = 196/389 (50%), Positives = 259/389 (66%), Gaps = 12/389 (3%)

Query: 9   PLAAVLMLSGSLVLTGCNDKETQQQGAQAPAP---EVGVVTLKAEPLNITTDLPGRTAAY 65
           P   +   + +++L  C  K        AP P   EVGVVT+K   + +T++LPGRT+A+
Sbjct: 7   PFRHISAATVAVILAACGQKPA------APPPQTLEVGVVTVKPATVPVTSELPGRTSAF 60

Query: 66  RIAEVRPQVSGIILKRNFVEGSDIKAGTSLYQIDPATYQAAYDSAKGDLAKAQASASIAR 125
            +A+VR +V GI+L+R F EG ++K G  LY+IDP  Y AA ++AK  LAKAQA+     
Sbjct: 61  LVAQVRARVDGIVLRREFTEGDEVKLGQRLYKIDPTPYIAALNNAKAVLAKAQANVGTQN 120

Query: 126 VTVNRYKPLLGTSYISKQDYDTAVSNLQQAEAAVVAAKAAVETARINLAYTKVTSPISGR 185
             V RYK L+  + +SKQDYD AV+ L QA A V + KA VETA+INL YT V SPI+GR
Sbjct: 121 ALVQRYKILVAANAVSKQDYDNAVAALGQAVADVASGKAGVETAQINLGYTDVVSPITGR 180

Query: 186 IGKSAVTEGALVTNGQATALSTVQQLDPMYVDVTQSSNDFLRLKQELASGALKQENGK-A 244
            G S VT GA V   QAT L+TVQQLDP+YV++TQSS + LRL++++  G L+      A
Sbjct: 181 SGLSQVTPGAYVQASQATLLTTVQQLDPVYVNLTQSSVEGLRLRRQIQEGRLQTTGANAA 240

Query: 245 KVKLLLENGAQYAQEGTLEFSDVTVDETTGSITIRAVFPNPNDTLLPGMFVRARLDEGVR 304
           KV LLLE+G  Y Q G L+F+DV+VD++TGS+T+RA+FPN +  LLPGMFVRAR+D+GV 
Sbjct: 241 KVTLLLEDGRAYPQPGQLQFTDVSVDQSTGSVTVRAIFPNKDRVLLPGMFVRARIDQGVN 300

Query: 305 SDALLVPQQGVTRNPRGDATALVVGADDKVELRTLKADQAIGDKWLVTDGLKAGDRVIVT 364
             A++VPQ GVT + +G A ALVVG D+KV  R +      G  W+V  GL+ GDRVIV 
Sbjct: 301 DKAIVVPQIGVTHDAKGQAVALVVGQDNKVTQRQIVTTGTYGSGWVVDGGLQPGDRVIVN 360

Query: 365 GLMKVRPGAQVKVQEVDTQAQKQPQSEAQ 393
           G+ K +PG  VK   V+ QA  QP S AQ
Sbjct: 361 GVEKAKPGMTVK--PVEAQAPAQPASGAQ 387