Pairwise Alignments

Query, 592 a.a., SmdB family multidrug efflux ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 598 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  292 bits (747), Expect = 3e-83
 Identities = 193/590 (32%), Positives = 310/590 (52%), Gaps = 17/590 (2%)

Query: 8   WPTLKRLLAYGSPYRKPLGLAVLMLWVAAAAEVAGPILISYFIDNYVAKGQLPLMIVCGL 67
           W  L RLL Y   +++ L  ++++L   A A    P+L+   I     K    ++     
Sbjct: 11  WSLLSRLLPYLGRHKRLLIGSLILLVPLALAGAVQPMLVGQAISVLQNKPTWEMLQGMSR 70

Query: 68  AAAYILLEL-------LAAALHYFQALLFNQAAVGVVQRLRTDVMDAALRQPLSAFDTQP 120
           +    LL L       +  A    Q     +    V   +R D+        +  FD  P
Sbjct: 71  SQGLNLLSLALLATIVVRLAFRGVQGYYVQEVGQRVTADIRQDLFQHVTALAVRFFDRTP 130

Query: 121 VGQLISRVTNDTEVIKDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALV-AICIFPAVF 179
           VG+L++R+TND E + +++      +L     + A+ +AMF L W++AL+  + + P   
Sbjct: 131 VGKLVTRLTNDVEALGEVFSTGAIGILSDIVSLLAIAIAMFWLQWQLALLLTVLLLPTTA 190

Query: 180 VVMGIYQYYSIPIVRRVRSYLADINDGFNEVINGMGVIQQFRQQIRFGERMSAASRSHYT 239
           V++   + Y      R R  L+++N    E + G+G++Q FR++    ++   A++ +  
Sbjct: 191 VILYFQRRYR-KANYRAREELSNLNASLQENMVGIGIVQSFRREAYNAQQFRVANQRYLE 249

Query: 240 ARMQTLRLDGFLLRPLLSLFSALVLCGLLMLFGFSG-EGSIGVGVLYAFINYLGRLNEPL 298
           A  +T+  D   +   L   S   +  +L L  F   +  +  G+L AFI Y  RL +PL
Sbjct: 250 AVDRTIFHDS-AISATLEWISLAAIAAVLWLGSFLVLQDQMNFGLLAAFILYSQRLFDPL 308

Query: 299 IELTSQQSILQQAVVAGERIFELMDRR---QQSYGTDDRPLE---SGRIDIEDLSFAYRD 352
            +L  + + +Q    A ERI ++ +     + +  T    LE   SG I  E++ F Y+ 
Sbjct: 309 RQLAEKFTSIQAGFTAIERIVDIFNEPIEIRDAAQTQQLSLETSQSGEIHFENVWFGYKP 368

Query: 353 DKKVLQHISLSVPSRGFVALVGHTGSGKSTLANLLMGYYPVNQGEVRLDGRPLASLSHRT 412
           D+ V+Q++++++     VALVG TG+GKST+  LL   Y   QG + +DG  + +L    
Sbjct: 369 DEPVIQNLNITIQPGQKVALVGPTGAGKSTIIRLLCRLYEPTQGRILIDGIDIRNLPQVE 428

Query: 413 LRQGVAMVQQDPVVIAESVLANVTLGRNISEEIVWQALETVQLAELVRSFPQGIHTRLGE 472
           LR+ + ++ QD  + A  V +N+TLG    +E V  A     +A L+ S PQG  T L E
Sbjct: 429 LRRHLGVILQDGFLFAGDVSSNITLGEPYDQEAVQAAARRTNVATLIESLPQGYATPLRE 488

Query: 473 QGNNLSVGQKQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALRLIREHTTLVVIA 532
           +G NLS GQ+QLLA ARV ++ P++LILDEATAN+D GTE  +Q AL  +    T ++IA
Sbjct: 489 RGTNLSGGQRQLLAFARVAIRDPKVLILDEATANLDVGTEALVQEALDDLLSDRTAIIIA 548

Query: 533 HRLSTIVDADSILVLHRGQAVEQGNHQQLLAQQGRYYQMYQLQLVGEELA 582
           HRLSTI +AD ILVL +GQ +E G+H  L+A+ G Y  +Y+LQ +G E+A
Sbjct: 549 HRLSTIRNADRILVLRQGQLIEDGSHDVLMARNGLYTSLYRLQSLGAEVA 598