Pairwise Alignments

Query, 592 a.a., SmdB family multidrug efflux ABC transporter permease/ATP-binding protein from Serratia liquefaciens MT49

Subject, 601 a.a., ABC transporter ATP-binding protein from Bifidobacterium breve UCC2003

 Score =  266 bits (679), Expect = 2e-75
 Identities = 171/574 (29%), Positives = 297/574 (51%), Gaps = 15/574 (2%)

Query: 11  LKRLLAYGSPYRKPLGLAVLMLWVAAAAEVAGPILISYFIDNYVAKGQLP--LMIVCGLA 68
           + R+  Y  PY   +   + ++   +   V+ P L    ID+ +    L    M+  GL 
Sbjct: 22  IARVGKYLKPYISRIVRILAVVVSMSCIVVSVPYLTKIMIDDAIPNKDLGKLAMLAGGLF 81

Query: 69  AAYILLELLAAALHYFQALLFNQAAVGVVQRLRTDVMDAALRQPLSAFDTQPVGQLISRV 128
              ++ EL   AL Y + +   +    +++ +R D+       P S FD++P G+++ RV
Sbjct: 82  CLIVIYEL---ALRY-RTVAITRVGQLMLKDMRRDLFTHIQTLPFSYFDSRPHGKILIRV 137

Query: 129 TNDTEVIKDLYVMVVSTVLKSAALIGAMLVAMFSLDWRMALVAICIFPAVFVVMGIYQYY 188
            N    + D     +  V          L+ MF++DW++AL ++ +FP + + + + QY+
Sbjct: 138 VNYVNTLSDALSSGLINVFSDIFTFFVTLIVMFAIDWQLALWSLVLFPVLIIWVRVLQYF 197

Query: 189 SIPIVRRVRSYLADINDGFNEVINGMGVIQQFRQQIRFGERMSAASRSHYTARMQTLRLD 248
                + + +  +++N   +E I G+   Q F ++    +          TA M    ++
Sbjct: 198 QRKAYQVLSNKQSNLNAFIHESIAGVKTTQTFAREKEQFDTFQQQQDDVRTAWMAAKHIE 257

Query: 249 GFLLRPLLSLFSALVLCGLLMLFGFSGEGSIGV--GVLYAFINYLGRLNEPLIELTSQQS 306
            FL+ P +   S + +   +   G +G G + V  G+L AF+ Y      P+I + +  +
Sbjct: 258 -FLMWPGVQTISVMTIA-FIYFVGITGFGGVSVTTGMLIAFVGYANNFWNPVINIGNFYN 315

Query: 307 ILQQAVVAGERIFELMDRRQQ---SYGTDDRPLESGRIDIEDLSFAYRDD-KKVLQHISL 362
            L       ERIFE +D + +     G  + P   G++D  D+ F Y DD + +L  +  
Sbjct: 316 QLVTCSAYLERIFETLDVKPEIANKPGATELPAIQGKVDFNDVVFRYEDDGRNILNLVDF 375

Query: 363 SVPSRGFVALVGHTGSGKSTLANLLMGYYPVNQGEVRLDGRPLASLSHRTLRQGVAMVQQ 422
            V     +ALVG TG+GK+T+ +LL  +Y V++G V +DG  +  ++  +LR+ + ++ Q
Sbjct: 376 HVTPGKTIALVGPTGAGKTTIVSLLSRFYDVSEGSVTIDGHDVRDVTLESLRRQMGVMLQ 435

Query: 423 DPVVIAESVLANVTLGR-NISEEIVWQALETVQLAELVRSFPQGIHTRLGEQGNNLSVGQ 481
           D  + + +V  N+  G+ + ++E +  A + V   E +   P G  T + E+G+ LS GQ
Sbjct: 436 DTFIFSGNVRDNIRYGKLDATDEEIEAAAKAVHAHEFIMELPDGYDTTVEERGSTLSAGQ 495

Query: 482 KQLLAMARVLVQAPQILILDEATANIDSGTEQAIQRALRLIREHTTLVVIAHRLSTIVDA 541
           +QL+A ARVL+  P+ILILDEAT+NID+ TE+A+Q  LR + +  T  +IAHRLSTI +A
Sbjct: 496 RQLIAFARVLLADPRILILDEATSNIDTRTEEALQAGLRHLLKGRTSFIIAHRLSTIENA 555

Query: 542 DSILVLHRGQAVEQGNHQQLLAQQGRYYQMYQLQ 575
           D I  +  GQ VE G H +LL  +G YY++Y+ Q
Sbjct: 556 DQIFYIDHGQIVEHGTHAELLEAKGAYYRLYESQ 589