Pairwise Alignments

Query, 615 a.a., protein translocase subunit SecD from Serratia liquefaciens MT49

Subject, 687 a.a., preprotein translocase subunit SecD from Burkholderia phytofirmans PsJN

 Score =  516 bits (1328), Expect = e-150
 Identities = 290/625 (46%), Positives = 399/625 (63%), Gaps = 38/625 (6%)

Query: 2   LNRYPLWKYLMLIVVIFIGLLYALPNIYGEDPAVQITGARG-VAASETTLDQVRTVLEKD 60
           +NRYPLWKY +++V + IGL+Y LPN++GE PAVQ++  +  V    TTL  V   L  +
Sbjct: 1   MNRYPLWKYAVMLVALVIGLVYTLPNLFGEAPAVQVSSGKATVKLDSTTLSAVEAALAAN 60

Query: 61  KITSKSIALENGA----ILARFSNPDIQLRAREALMAELGD-----KFVVALNLAPATPA 111
           +I    +  +N A    I  R  + D QLR ++ L   L       +++VALNL  A+P 
Sbjct: 61  QIKPDDVTFDNSATNANIRVRLPDTDTQLRVKDLLQKSLNSDPTDPQYIVALNLQSASPR 120

Query: 112 WLAMLGAEPMKLGLDLRGGVHFLMEVDMDTALSKLQEQTMDTLRSELREKGIPYASIRKL 171
           WL  L A PM LGLDLRGGVHFL++VDM  AL+K  +      R+ LR+K I    + ++
Sbjct: 121 WLTALHALPMYLGLDLRGGVHFLLQVDMAGALNKKLDSDASDARTLLRDKNIRDGGVNRV 180

Query: 172 DNNGVEVRFRDDAARDQAISYLSPRQRDMVFSA----NGSNTLKANLTDARLSEAREYAV 227
            N  V + F D A  D A   LS    ++ +++    +G   L    T A     ++ A+
Sbjct: 181 -NQSVVINFADQATADNASKQLSRSIAELQWASQAGPDGGVQLVGTFTPAVQKAVQDAAL 239

Query: 228 QQNITILRNRVNQLGVAEPLVQRQGSDRIVVELPGIQDTARAKEILGATATLEFRL---V 284
           +QNIT L NRVN+LGVAEP++Q+QG+DRIVVELPG+QDTA+AK+I+G TATLE RL   V
Sbjct: 240 KQNITTLHNRVNELGVAEPVIQQQGADRIVVELPGVQDTAKAKDIIGRTATLEARLADPV 299

Query: 285 NTNADVTAAANGRVPGDSEVKDTREGQPVVLYKRVILTGDHITDSTSSTDEYNQPQVNIS 344
           NT+ +     +  VP   E+       PV+L K++I TGD I D+++  DE+ +P VNI 
Sbjct: 300 NTHPN----PSDPVPPGDELFTQGNQTPVLLRKQIIFTGDRIIDASAGFDEHQRPSVNIR 355

Query: 345 LDSAGGTAMSNFTKDNIGKPMATLFVEYKDSGKKDANGRAILVKQEEVINVANIQSRLGN 404
           LDSAGG A+++ ++DNIGKPMA +  E K  G              EV+ VA IQS LG+
Sbjct: 356 LDSAGGRAVASISRDNIGKPMAMVLFE-KGKG--------------EVLTVATIQSELGD 400

Query: 405 SFRITGIGNPNEARQLSLLLRAGALIAPIQIVEERTIGPTLGQQNITQGLEACLWGLVAS 464
            F+ITG   P  A  L+LLLRAG+L AP+ I+EERTIGP+LG  NI +G  + +WG  A 
Sbjct: 401 RFQITGQATPQGAADLALLLRAGSLAAPMDIIEERTIGPSLGADNIKKGFHSVVWGFAAI 460

Query: 465 IVFMVVWYRKFGMIATTALVANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLI 524
            VFM+ +Y  FG+I+   L  NL+L++ V+S+L  ATLT+PGIA I L L +A+DANVLI
Sbjct: 461 AVFMIAYYMLFGVISMIGLSVNLLLLIAVLSMLQ-ATLTLPGIAAIALALGMAIDANVLI 519

Query: 525 NERIKEELKNGRSVQQAIHEGYKGAFSSIVDANITTLITAIILYAVGTGSIKGFAITTAI 584
           NER++EEL+NG   Q AI  GY  A+++I+D+N+TTLI  I L A G+G ++GFAI   I
Sbjct: 520 NERVREELRNGAPPQLAIQNGYAHAWATILDSNVTTLIAGIALLAFGSGPVRGFAIVHCI 579

Query: 585 GVATSMFTAIVGTRAIVNLLYGGKR 609
           G+ TSMF+A+  +R IVNL YGGK+
Sbjct: 580 GILTSMFSAVFFSRGIVNLWYGGKK 604